Literature DB >> 15576681

Genetics of lagging strand DNA synthesis and maturation in fission yeast: suppression analysis links the Dna2-Cdc24 complex to DNA polymerase delta.

Hiroyuki Tanaka1, Gi-Hyuck Ryu, Yeon-Soo Seo, Stuart A MacNeill.   

Abstract

The Cdc24 protein is essential for the completion of chromosomal DNA replication in fission yeast. Although its precise role in this process is unclear, Cdc24 forms a complex with Dna2, a conserved endonuclease-helicase implicated in the removal of the RNA-DNA primer during Okazaki fragment processing. To gain further insights into Cdc24-Dna2 function, we screened for chromosomal suppressors of the temperature-sensitive cdc24-M38 allele and mapped the suppressing mutations into six complementation groups. Two of these mutations defined genes encoding the Pol3 and Cdc27 subunits of DNA polymerase delta. Sequence analysis revealed that all the suppressing mutations in Cdc27 resulted in truncation of the protein and loss of sequences that included the conserved C-terminal PCNA binding motif, previously shown to play an important role in maximizing enzyme processivity in vitro. Deletion of this motif is shown to be sufficient for suppression of both cdc24-M38 and dna2-C2, a temperature-sensitive allele of dna2(+), suggesting that disruption of the interaction between Cdc27 and PCNA renders the activity of the Cdc24-Dna2 complex dispensable.

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Year:  2004        PMID: 15576681      PMCID: PMC535672          DOI: 10.1093/nar/gkh963

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  35 in total

Review 1.  Replication of the lagging strand: a concert of at least 23 polypeptides.

Authors:  U Hübscher; Y S Seo
Journal:  Mol Cells       Date:  2001-10-31       Impact factor: 5.034

2.  The fission yeast pfh1(+) gene encodes an essential 5' to 3' DNA helicase required for the completion of S-phase.

Authors:  Hiroyuki Tanaka; Gi-Hyuck Ryu; Yeon-Soo Seo; Koichi Tanaka; Hiroto Okayama; Stuart A MacNeill; Yasuhito Yuasa
Journal:  Nucleic Acids Res       Date:  2002-11-01       Impact factor: 16.971

3.  Reconstitution of human DNA polymerase delta using recombinant baculoviruses: the p12 subunit potentiates DNA polymerizing activity of the four-subunit enzyme.

Authors:  Vladimir N Podust; Long-Sheng Chang; Robert Ott; Grigory L Dianov; Ellen Fanning
Journal:  J Biol Chem       Date:  2001-11-15       Impact factor: 5.157

4.  RPA governs endonuclease switching during processing of Okazaki fragments in eukaryotes.

Authors:  S H Bae; K H Bae; J A Kim; Y S Seo
Journal:  Nature       Date:  2001-07-26       Impact factor: 49.962

5.  Tripartite structure of Saccharomyces cerevisiae Dna2 helicase/endonuclease.

Authors:  S H Bae; J A Kim; E Choi; K H Lee; H Y Kang; H D Kim; J H Kim; K H Bae; Y Cho; C Park; Y S Seo
Journal:  Nucleic Acids Res       Date:  2001-07-15       Impact factor: 16.971

6.  Characterization of the enzymatic properties of the yeast dna2 Helicase/endonuclease suggests a new model for Okazaki fragment processing.

Authors:  S H Bae; Y S Seo
Journal:  J Biol Chem       Date:  2000-12-01       Impact factor: 5.157

7.  Structure and activity associated with multiple forms of Schizosaccharomyces pombe DNA polymerase delta.

Authors:  S Zuo; V Bermudez; G Zhang; Z Kelman; J Hurwitz
Journal:  J Biol Chem       Date:  2000-02-18       Impact factor: 5.157

8.  Genetic analyses of Schizosaccharomyces pombe dna2(+) reveal that dna2 plays an essential role in Okazaki fragment metabolism.

Authors:  H Y Kang; E Choi; S H Bae; K H Lee; B S Gim; H D Kim; C Park; S A MacNeill; Y S Seo
Journal:  Genetics       Date:  2000-07       Impact factor: 4.562

9.  The influence of the Cdc27 subunit on the properties of the Schizosaccharomyces pombe DNA polymerase delta.

Authors:  Vladimir P Bermudez; Stuart A MacNeill; Inger Tappin; Jerard Hurwitz
Journal:  J Biol Chem       Date:  2002-07-17       Impact factor: 5.157

10.  Canavanine resistance and the mechanism of arginine uptake in the fission yeast Schizosaccharomyces pombe.

Authors:  P A Fantes; J Creanor
Journal:  J Gen Microbiol       Date:  1984-12
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  15 in total

Review 1.  Pif1 family DNA helicases: A helpmate to RNase H?

Authors:  Thomas J Pohl; Virginia A Zakian
Journal:  DNA Repair (Amst)       Date:  2019-06-17

2.  Failed gene conversion leads to extensive end processing and chromosomal rearrangements in fission yeast.

Authors:  Helen Tinline-Purvis; Andrew P Savory; Jason K Cullen; Anoushka Davé; Jennifer Moss; Wendy L Bridge; Samuel Marguerat; Jürg Bähler; Jiannis Ragoussis; Richard Mott; Carol A Walker; Timothy C Humphrey
Journal:  EMBO J       Date:  2009-10-01       Impact factor: 11.598

3.  Cdc24 Is Essential for Long-range End Resection in the Repair of Double-stranded DNA Breaks.

Authors:  Huimin Zhang; Yu Hua; Rui Li; Daochun Kong
Journal:  J Biol Chem       Date:  2016-10-11       Impact factor: 5.157

4.  The N-terminal 45-kDa domain of Dna2 endonuclease/helicase targets the enzyme to secondary structure DNA.

Authors:  Chul-Hwan Lee; Miju Lee; Hyo-Jin Kang; Do-Hyung Kim; Young-Hoon Kang; Sung-Ho Bae; Yeon-Soo Seo
Journal:  J Biol Chem       Date:  2013-01-22       Impact factor: 5.157

5.  RAG2 abolishes RAG1 aggregation to facilitate V(D)J recombination.

Authors:  Tingting Gan; Yuhong Wang; Yang Liu; David G Schatz; Jiazhi Hu
Journal:  Cell Rep       Date:  2021-10-12       Impact factor: 9.995

6.  Evidence suggesting that Pif1 helicase functions in DNA replication with the Dna2 helicase/nuclease and DNA polymerase delta.

Authors:  Martin E Budd; Clara C Reis; Stephanie Smith; Kyungjae Myung; Judith L Campbell
Journal:  Mol Cell Biol       Date:  2006-04       Impact factor: 4.272

7.  Contrasting effects of Elg1-RFC and Ctf18-RFC inactivation in the absence of fully functional RFC in fission yeast.

Authors:  Jiyoung Kim; Kathryn Robertson; Katie J L Mylonas; Fiona C Gray; Iryna Charapitsa; Stuart A MacNeill
Journal:  Nucleic Acids Res       Date:  2005-07-21       Impact factor: 16.971

8.  A network of multi-tasking proteins at the DNA replication fork preserves genome stability.

Authors:  Martin E Budd; Amy Hin Yan Tong; Piotr Polaczek; Xiao Peng; Charles Boone; Judith L Campbell
Journal:  PLoS Genet       Date:  2005-12-02       Impact factor: 5.917

9.  Functional mapping of the fission yeast DNA polymerase delta B-subunit Cdc1 by site-directed and random pentapeptide insertion mutagenesis.

Authors:  Javier Sanchez Garcia; Andrey G Baranovskiy; Elena V Knatko; Fiona C Gray; Tahir H Tahirov; Stuart A MacNeill
Journal:  BMC Mol Biol       Date:  2009-08-17       Impact factor: 2.946

10.  Fission yeast Pxd1 promotes proper DNA repair by activating Rad16XPF and inhibiting Dna2.

Authors:  Jia-Min Zhang; Xiao-Man Liu; Yue-He Ding; Liang-Yao Xiong; Jing-Yi Ren; Zhi-Xiong Zhou; Hai-Tao Wang; Mei-Jun Zhang; Yang Yu; Meng-Qiu Dong; Li-Lin Du
Journal:  PLoS Biol       Date:  2014-09-09       Impact factor: 8.029

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