Literature DB >> 15572466

SYMMETREE: whole-tree analysis of differential diversification rates.

Kai M A Chan1, Brian R Moore.   

Abstract

UNLABELLED: SymmeTREE implements several tests of differential diversification rates that exploit information on the topological distribution of species diversity throughout entire trees to address two general questions: (1) Has a given tree experienced significant variation in diversification rates among its branches? and (2) If so, along which branches have significant shifts in diversification rate occurred? These explicitly model-based methods are robust to uncertainty in estimates of branch length/duration and can accommodate incompletely resolved trees and other forms of phylogenetic uncertainty. AVAILABILITY: http://www.phylodiversity.net/bmoore/software.html CONTACT: brian.moore@yale.edu.

Mesh:

Year:  2004        PMID: 15572466     DOI: 10.1093/bioinformatics/bti175

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


  42 in total

1.  Oil-producing flowers within the Iridoideae (Iridaceae): evolutionary trends in the flowers of the New World genera.

Authors:  Olivier Chauveau; Lilian Eggers; Tatiana T Souza-Chies; Sophie Nadot
Journal:  Ann Bot       Date:  2012-07-10       Impact factor: 4.357

2.  Is evolutionary history repeatedly rewritten in light of new fossil discoveries?

Authors:  J E Tarver; P C J Donoghue; M J Benton
Journal:  Proc Biol Sci       Date:  2010-09-01       Impact factor: 5.349

3.  The uneven phylogeny and biogeography of Erodium (Geraniaceae): radiations in the Mediterranean and recent recurrent intercontinental colonization.

Authors:  Omar Fiz-Palacios; Pablo Vargas; Roger Vila; Alexander S T Papadopulos; Juan José Aldasoro
Journal:  Ann Bot       Date:  2010-09-20       Impact factor: 4.357

4.  Rapid diversification and not clade age explains high diversity in neotropical Adelpha butterflies.

Authors:  Sean P Mullen; Wesley K Savage; Niklas Wahlberg; Keith R Willmott
Journal:  Proc Biol Sci       Date:  2010-11-24       Impact factor: 5.349

5.  A Bayesian approach for evaluating the impact of historical events on rates of diversification.

Authors:  Brian R Moore; Michael J Donoghue
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-26       Impact factor: 11.205

6.  Colloquium paper: a phylogenetic perspective on the distribution of plant diversity.

Authors:  Michael J Donoghue
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-11       Impact factor: 11.205

7.  Rates of dinosaur limb evolution provide evidence for exceptional radiation in Mesozoic birds.

Authors:  Roger B J Benson; Jonah N Choiniere
Journal:  Proc Biol Sci       Date:  2013-08-14       Impact factor: 5.349

8.  Nine exceptional radiations plus high turnover explain species diversity in jawed vertebrates.

Authors:  Michael E Alfaro; Francesco Santini; Chad Brock; Hugo Alamillo; Alex Dornburg; Daniel L Rabosky; Giorgio Carnevale; Luke J Harmon
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-24       Impact factor: 11.205

9.  Influence of sexual selection and feeding functional morphology on diversification rate of parrotfishes (Scaridae).

Authors:  Erem Kazancioglu; Thomas J Near; Reinhold Hanel; Peter C Wainwright
Journal:  Proc Biol Sci       Date:  2009-07-08       Impact factor: 5.349

10.  The frequency of polyploid speciation in vascular plants.

Authors:  Troy E Wood; Naoki Takebayashi; Michael S Barker; Itay Mayrose; Philip B Greenspoon; Loren H Rieseberg
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-10       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.