Literature DB >> 15564299

Procom: a web-based tool to compare multiple eukaryotic proteomes.

Jin Billy Li1, Miao Zhang, Susan K Dutcher, Gary D Stormo.   

Abstract

UNLABELLED: Each organism has traits that are shared with some, but not all, organisms. Identification of genes needed for a particular trait can be accomplished by a comparative genomics approach using three or more organisms. Genes that occur in organisms without the trait are removed from the set of genes in common among organisms with the trait. To facilitate these comparisons, a web-based server, Procom, was developed to identify the subset of genes that may be needed for a trait. AVAILABILITY: The Procom program is freely available with documentation and examples at http://ural.wustl.edu/~billy/Procom/ CONTACT: billy@ural.wustl.edu.

Mesh:

Substances:

Year:  2004        PMID: 15564299     DOI: 10.1093/bioinformatics/bti161

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


  4 in total

1.  Genetic and genomic approaches to identify genes involved in flagellar assembly in Chlamydomonas reinhardtii.

Authors:  Huawen Lin; Susan K Dutcher
Journal:  Methods Cell Biol       Date:  2015-02-14       Impact factor: 1.441

2.  Detecting Coevolution of Functionally Related Proteins for Automated Protein Annotation.

Authors:  Alan L Kwan; Susan K Dutcher; Gary D Stormo
Journal:  Proc IEEE Int Symp Bioinformatics Bioeng       Date:  2010

3.  Computational identification of strain-, species- and genus-specific proteins.

Authors:  Raja Mazumder; Darren A Natale; Sudhir Murthy; Rathi Thiagarajan; Cathy H Wu
Journal:  BMC Bioinformatics       Date:  2005-11-23       Impact factor: 3.169

4.  Signature, a web server for taxonomic characterization of sequence samples using signature genes.

Authors:  Bas E Dutilh; Ying He; Maarten L Hekkelman; Martijn A Huynen
Journal:  Nucleic Acids Res       Date:  2008-05-17       Impact factor: 16.971

  4 in total

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