Literature DB >> 15563488

Gene expression profiles in formalin-fixed, paraffin-embedded tissues obtained with a novel assay for microarray analysis.

Marina Bibikova1, Joanne M Yeakley, Eugene Chudin, Jing Chen, Eliza Wickham, Jessica Wang-Rodriguez, Jian-Bing Fan.   

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Year:  2004        PMID: 15563488     DOI: 10.1373/clinchem.2004.037432

Source DB:  PubMed          Journal:  Clin Chem        ISSN: 0009-9147            Impact factor:   8.327


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  15 in total

1.  Seasonal variation in expression of markers in the vitamin D pathway in prostate tissue.

Authors:  Mara M Epstein; Ove Andrén; Julie L Kasperzyk; Irene M Shui; Kathryn L Penney; Katja Fall; Jennifer R Rider; Meir J Stampfer; Swen-Olof Andersson; Edward Giovannucci; Lorelei A Mucci
Journal:  Cancer Causes Control       Date:  2012-06-19       Impact factor: 2.506

2.  Gene expression array testing of FFPE archival breast tumor samples: an optimized protocol for WG-DASL sample preparation.

Authors:  C C Ton; N Vartanian; X Chai; M G Lin; X Yuan; K E Malone; C I Li; A Dawson; C Sather; J Delrow; L Hsu; P L Porter
Journal:  Breast Cancer Res Treat       Date:  2010-09-15       Impact factor: 4.872

3.  Whole-genome gene expression profiling of formalin-fixed, paraffin-embedded tissue samples.

Authors:  Craig April; Brandy Klotzle; Thomas Royce; Eliza Wickham-Garcia; Tanya Boyaniwsky; John Izzo; Donald Cox; Wendell Jones; Renee Rubio; Kristina Holton; Ursula Matulonis; John Quackenbush; Jian-Bing Fan
Journal:  PLoS One       Date:  2009-12-03       Impact factor: 3.240

4.  Application of a Clinical Whole-Transcriptome Assay for Staging and Prognosis of Prostate Cancer Diagnosed in Needle Core Biopsy Specimens.

Authors:  Beatrice S Knudsen; Hyung L Kim; Nicholas Erho; Heesun Shin; Mohammed Alshalalfa; Lucia L C Lam; Imelda Tenggara; Karen Chadwich; Theo Van Der Kwast; Neil Fleshner; Elai Davicioni; Peter R Carroll; Matthew R Cooperberg; June M Chan; Jeffry P Simko
Journal:  J Mol Diagn       Date:  2016-03-03       Impact factor: 5.568

5.  Analyses and interpretation of whole-genome gene expression from formalin-fixed paraffin-embedded tissue: an illustration with breast cancer tissues.

Authors:  Muhammad G Kibriya; Farzana Jasmine; Shantanu Roy; Rachelle M Paul-Brutus; Maria Argos; Habibul Ahsan
Journal:  BMC Genomics       Date:  2010-11-08       Impact factor: 3.969

6.  Expression profiling of formalin-fixed paraffin-embedded primary breast tumors using cancer-specific and whole genome gene panels on the DASL® platform.

Authors:  Monica M Reinholz; Jeanette E Eckel-Passow; S Keith Anderson; Yan W Asmann; Michael A Zschunke; Ann L Oberg; Ann E McCullough; Amylou C Dueck; Beiyun Chen; Craig S April; Eliza Wickham-Garcia; Robert B Jenkins; Julie M Cunningham; Jin Jen; Edith A Perez; Jian-Bing Fan; Wilma L Lingle
Journal:  BMC Med Genomics       Date:  2010-12-20       Impact factor: 3.063

7.  Upregulated FGFR1 expression is associated with the transition of hormone-naive to castrate-resistant prostate cancer.

Authors:  K Armstrong; I Ahmad; G Kalna; S S Tan; J Edwards; C N Robson; H Y Leung
Journal:  Br J Cancer       Date:  2011-09-27       Impact factor: 7.640

8.  Quality assessment metrics for whole genome gene expression profiling of paraffin embedded samples.

Authors:  Douglas W Mahoney; Terry M Therneau; S Keith Anderson; Jin Jen; Jean-Pierre A Kocher; Monica M Reinholz; Edith A Perez; Jeanette E Eckel-Passow
Journal:  BMC Res Notes       Date:  2013-01-30

9.  A tissue biomarker panel predicting systemic progression after PSA recurrence post-definitive prostate cancer therapy.

Authors:  Tohru Nakagawa; Thomas M Kollmeyer; Bruce W Morlan; S Keith Anderson; Eric J Bergstralh; Brian J Davis; Yan W Asmann; George G Klee; Karla V Ballman; Robert B Jenkins
Journal:  PLoS One       Date:  2008-05-28       Impact factor: 3.240

10.  Biomarker discovery for colon cancer using a 761 gene RT-PCR assay.

Authors:  Kim M Clark-Langone; Jenny Y Wu; Chithra Sangli; Angela Chen; James L Snable; Anhthu Nguyen; James R Hackett; Joffre Baker; Greg Yothers; Chungyeul Kim; Maureen T Cronin
Journal:  BMC Genomics       Date:  2007-08-15       Impact factor: 3.969

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