Literature DB >> 15549919

Equilibrium free energy estimates based on nonequilibrium work relations and extended dynamics.

Erdinç Atilgan1, Sean X Sun.   

Abstract

Jarzynski's relation and the fluctuation theorem have established important connections between nonequilibrium statistical mechanics and equilibrium thermodynamics. In particular, an exact relationship between the equilibrium free energy and the nonequilibrium work is useful for computer simulations. In this paper, we exploit the fact that the free energy is a state function, independent of the pathway taken to change the equilibrium ensemble. We show that a generalized expression is advantageous for computer simulations of free energy differences. Several methods based on this idea are proposed. The accuracy and efficiency of the proposed methods are evaluated with a model problem. (c) 2004 American Institute of Physics.

Mesh:

Year:  2004        PMID: 15549919     DOI: 10.1063/1.1813434

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  2 in total

1.  Density-dependent analysis of nonequilibrium paths improves free energy estimates.

Authors:  David D L Minh
Journal:  J Chem Phys       Date:  2009-05-28       Impact factor: 3.488

2.  Optimal estimators and asymptotic variances for nonequilibrium path-ensemble averages.

Authors:  David D L Minh; John D Chodera
Journal:  J Chem Phys       Date:  2009-10-07       Impact factor: 3.488

  2 in total

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