Literature DB >> 15545487

Alkalibacterium psychrotolerans sp. nov., a psychrotolerant obligate alkaliphile that reduces an indigo dye.

Isao Yumoto1,2, Kikue Hirota2, Yoshinobu Nodasaka3, Yuji Yokota2, Tamotsu Hoshino2, Kenji Nakajima2.   

Abstract

A psychrotolerant, obligately alkaliphilic bacterium, IDR2-2(T), which is able to reduce indigo dye was isolated from a fermented polygonum indigo (Polygonum tinctorium Lour.) produced in Date, Hokkaido, using a traditional Japanese method. The isolate grew at pH 9-12 but not at pH 7-8. It was a Gram-positive, facultatively anaerobic, straight rod-shaped bacterium with peritrichous flagella. The isolate grew in 0-17 % (w/v) NaCl but not at NaCl concentrations higher than 18 % (w/v). Its major cellular fatty acids were C(14 : 0), C(16 : 0), C(16 : 1)9c and C(18 : 1)9c, and its DNA G+C content was 40.6 mol%. dl-lactic acid was the major end-product from d-glucose. No quinones could be detected. The peptidoglycan type was A4beta, Orn-d-Glu. A phylogenetic analysis based on 16S rRNA gene sequence data indicated that strain IDR2-2(T) is a member of the genus Alkalibacterium. DNA-DNA hybridization revealed low relatedness (less than 25 %) between the isolate and two phylogenetically related strains, Alkalibacterium olivapovliticus and Marinilactibacillus psychrotolerans. On the basis of phenotypic characteristics, phylogenetic data and DNA-DNA relatedness data, the isolate merits classification as a novel species, for which the name Alkalibacterium psychrotolerans sp. nov. is proposed. The type strain is IDR2-2(T) (=JCM 12281(T)=NCIMB 13981(T)).

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Year:  2004        PMID: 15545487     DOI: 10.1099/ijs.0.63130-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  11 in total

Review 1.  Alkaliphilic bacteria: applications in industrial biotechnology.

Authors:  Indira P Sarethy; Yashi Saxena; Aditi Kapoor; Manisha Sharma; Sanjeev K Sharma; Vandana Gupta; Sanjay Gupta
Journal:  J Ind Microbiol Biotechnol       Date:  2011-04-11       Impact factor: 3.346

2.  Characterization of the microbiota in long- and short-term natural indigo fermentation.

Authors:  Zhihao Tu; Helena de Fátima Silva Lopes; Kensuke Igarashi; Isao Yumoto
Journal:  J Ind Microbiol Biotechnol       Date:  2019-08-20       Impact factor: 3.346

3.  Development of media to accelerate the isolation of indigo-reducing bacteria, which are difficult to isolate using conventional media.

Authors:  Masatoshi Nishita; Kikue Hirota; Hidetoshi Matsuyama; Isao Yumoto
Journal:  World J Microbiol Biotechnol       Date:  2017-06-05       Impact factor: 3.312

4.  Analysis of microbiota involved in the aged natural fermentation of indigo.

Authors:  Takahiro Okamoto; Kenichi Aino; Takashi Narihiro; Hidetoshi Matsuyama; Isao Yumoto
Journal:  World J Microbiol Biotechnol       Date:  2017-03-11       Impact factor: 3.312

5.  Employing a biochemical protecting group for a sustainable indigo dyeing strategy.

Authors:  Tammy M Hsu; Ditte H Welner; Zachary N Russ; Bernardo Cervantes; Ramya L Prathuri; Paul D Adams; John E Dueber
Journal:  Nat Chem Biol       Date:  2018-01-08       Impact factor: 15.040

6.  Insight into the bacterial diversity of fermentation woad dye vats as revealed by PCR-DGGE and pyrosequencing.

Authors:  Vesna Milanović; Andrea Osimani; Manuela Taccari; Cristiana Garofalo; Alessandro Butta; Francesca Clementi; Lucia Aquilanti
Journal:  J Ind Microbiol Biotechnol       Date:  2017-02-28       Impact factor: 3.346

7.  Implementation of a biotechnological process for vat dyeing with woad.

Authors:  Andrea Osimani; Lucia Aquilanti; Gessica Baldini; Gloria Silvestri; Alessandro Butta; Francesca Clementi
Journal:  J Ind Microbiol Biotechnol       Date:  2012-05-12       Impact factor: 3.346

Review 8.  Marine extremophiles: a source of hydrolases for biotechnological applications.

Authors:  Gabriel Zamith Leal Dalmaso; Davis Ferreira; Alane Beatriz Vermelho
Journal:  Mar Drugs       Date:  2015-04-03       Impact factor: 5.118

Review 9.  Recent advances in heterogeneous photocatalytic decolorization of synthetic dyes.

Authors:  Nurhidayatullaili Muhd Julkapli; Samira Bagheri; Sharifah Bee Abd Hamid
Journal:  ScientificWorldJournal       Date:  2014-06-25

Review 10.  Microbial Communities Associated With Indigo Fermentation That Thrive in Anaerobic Alkaline Environments.

Authors:  Keiichi Aino; Kikue Hirota; Takahiro Okamoto; Zhihao Tu; Hidetoshi Matsuyama; Isao Yumoto
Journal:  Front Microbiol       Date:  2018-09-18       Impact factor: 5.640

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