Literature DB >> 15530987

Chemical cross-linking and protein-protein interactions-a review with illustrative protocols.

Ronald Kluger1, Amer Alagic.   

Abstract

The general term "protein-protein" interactions refers to the effects of proteins upon each other. The interactions can arise from co-existence in organized structural arrangements or in transient encounters. The latter are difficult to detect and define. Introduction of specific, stable chemical linkages can establish permanent relationships between what would normally be transiently associated species. The review covers the types and purposes of various linkers, including the comparative advantages of various approaches. The emphasis is on practical applications and thus includes methodology in the form of practical protocols for introducing the linkages and interpreting the outcomes.

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Year:  2004        PMID: 15530987     DOI: 10.1016/j.bioorg.2004.08.002

Source DB:  PubMed          Journal:  Bioorg Chem        ISSN: 0045-2068            Impact factor:   5.275


  23 in total

1.  "Zero-length" cross-linking in solid state as an approach for analysis of protein-protein interactions.

Authors:  Ahmed El-Shafey; Nikola Tolic; Malin M Young; Kenneth Sale; Richard D Smith; Vladimir Kery
Journal:  Protein Sci       Date:  2006-03       Impact factor: 6.725

2.  Structural study of metastable amyloidogenic protein oligomers by photo-induced cross-linking of unmodified proteins.

Authors:  Gal Bitan
Journal:  Methods Enzymol       Date:  2006       Impact factor: 1.600

3.  Palladium Oxidative Addition Complexes for Peptide and Protein Cross-linking.

Authors:  Koji Kubota; Peng Dai; Bradley L Pentelute; Stephen L Buchwald
Journal:  J Am Chem Soc       Date:  2018-02-13       Impact factor: 15.419

4.  Covalent capture of phospho-dependent protein oligomerization by site-specific incorporation of a diazirine photo-cross-linker.

Authors:  Miquel Vila-Perelló; Matthew R Pratt; Frej Tulin; Tom W Muir
Journal:  J Am Chem Soc       Date:  2007-06-13       Impact factor: 15.419

5.  Structure of transmembrane domain of lysosome-associated membrane protein type 2a (LAMP-2A) reveals key features for substrate specificity in chaperone-mediated autophagy.

Authors:  Ashok K Rout; Marie-Paule Strub; Grzegorz Piszczek; Nico Tjandra
Journal:  J Biol Chem       Date:  2014-10-22       Impact factor: 5.157

6.  Protein interactions, post-translational modifications and topologies in human cells.

Authors:  Juan D Chavez; Chad R Weisbrod; Chunxiang Zheng; Jimmy K Eng; James E Bruce
Journal:  Mol Cell Proteomics       Date:  2013-01-25       Impact factor: 5.911

Review 7.  Marked by association: techniques for proximity-dependent labeling of proteins in eukaryotic cells.

Authors:  Kyle J Roux
Journal:  Cell Mol Life Sci       Date:  2013-02-19       Impact factor: 9.261

8.  Investigating Therapeutic Protein Structure with Diethylpyrocarbonate Labeling and Mass Spectrometry.

Authors:  Nicholas B Borotto; Yuping Zhou; Stephen R Hollingsworth; John E Hale; Eric M Graban; Robert C Vaughan; Richard W Vachet
Journal:  Anal Chem       Date:  2015-10-01       Impact factor: 6.986

9.  Bifunctional cross-linking approaches for mass spectrometry-based investigation of nucleic acids and protein-nucleic acid assemblies.

Authors:  M Scalabrin; S M Dixit; M M Makshood; C E Krzemien; Daniele Fabris
Journal:  Methods       Date:  2018-05-10       Impact factor: 3.608

10.  Quantifying the strength of heterointeractions among receptor tyrosine kinases from different subfamilies: Implications for cell signaling.

Authors:  Michael D Paul; Hana N Grubb; Kalina Hristova
Journal:  J Biol Chem       Date:  2020-05-27       Impact factor: 5.157

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