Literature DB >> 15530487

A computational method for inferring growth parameters and shape changes during development based on clonal analysis.

Anne-Gaëlle Rolland-Lagan1, Enrico Coen, Stephen J Impey, J Andrew Bangham.   

Abstract

We describe a method for estimating growth parameters in various regions of a developing organ undergoing cell divisions, along with the corresponding changes in organ shape. Growth parameters are computed by coupling clonal analysis with a growth model, allowing a wide range of developmental stages to be covered. The method was applied to the development of dorsal petal lobes of Antirrhinum majus. The resulting description of growth patterns and shape changes is consistent with direct observations using scanning electron microscopy. This method can potentially be applied to other organs, and opens the way to comparative studies of growth and gene expression patterns.

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Year:  2005        PMID: 15530487     DOI: 10.1016/j.jtbi.2004.04.045

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  13 in total

1.  The inside view on plant growth.

Authors:  Edgar P Spalding
Journal:  Nat Methods       Date:  2010-07       Impact factor: 28.547

2.  Growth and cellular patterns in the petal epidermis of Antirrhinum majus: empirical studies.

Authors:  Magdalena Raczyńska-Szajgin; Jerzy Nakielski
Journal:  Ann Bot       Date:  2013-11-18       Impact factor: 4.357

3.  Mapping shape quantitative trait loci using a radius-centroid-contour model.

Authors:  G Fu; W Bo; X Pang; Z Wang; L Chen; Y Song; Z Zhang; J Li; R Wu
Journal:  Heredity (Edinb)       Date:  2013-04-10       Impact factor: 3.821

4.  Application of Optical Topometry to Analysis of the Plant Epidermis.

Authors:  Miranda J Haus; Ryan D Kelsch; Thomas W Jacobs
Journal:  Plant Physiol       Date:  2015-08-19       Impact factor: 8.340

5.  Variability and Constancy in Cellular Growth of Arabidopsis Sepals.

Authors:  Gerardo Tauriello; Heather M Meyer; Richard S Smith; Petros Koumoutsakos; Adrienne H K Roeder
Journal:  Plant Physiol       Date:  2015-10-02       Impact factor: 8.340

Review 6.  Computational morphodynamics: a modeling framework to understand plant growth.

Authors:  Vijay Chickarmane; Adrienne H K Roeder; Paul T Tarr; Alexandre Cunha; Cory Tobin; Elliot M Meyerowitz
Journal:  Annu Rev Plant Biol       Date:  2010       Impact factor: 26.379

7.  Genetic control of organ shape and tissue polarity.

Authors:  Amelia A Green; J Richard Kennaway; Andrew I Hanna; J Andrew Bangham; Enrico Coen
Journal:  PLoS Biol       Date:  2010-11-09       Impact factor: 8.029

8.  A computational clonal analysis of the developing mouse limb bud.

Authors:  Luciano Marcon; Carlos G Arqués; Miguel S Torres; James Sharpe
Journal:  PLoS Comput Biol       Date:  2011-02-10       Impact factor: 4.475

9.  Generation of diverse biological forms through combinatorial interactions between tissue polarity and growth.

Authors:  Richard Kennaway; Enrico Coen; Amelia Green; Andrew Bangham
Journal:  PLoS Comput Biol       Date:  2011-06-16       Impact factor: 4.475

10.  Large-scale clonal analysis reveals unexpected complexity in surface ectoderm morphogenesis.

Authors:  Anne-Cécile Petit; Jean-François Nicolas
Journal:  PLoS One       Date:  2009-02-06       Impact factor: 3.240

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