Literature DB >> 15525146

Generalized Langevin equation with fractional Gaussian noise: subdiffusion within a single protein molecule.

S C Kou1, X Sunney Xie.   

Abstract

By introducing fractional Gaussian noise into the generalized Langevin equation, the subdiffusion of a particle can be described as a stationary Gaussian process with analytical tractability. This model is capable of explaining the equilibrium fluctuation of the distance between an electron transfer donor and acceptor pair within a protein that spans a broad range of time scales, and is in excellent agreement with a single-molecule experiment.

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Year:  2004        PMID: 15525146     DOI: 10.1103/PhysRevLett.93.180603

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  43 in total

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3.  Information theoretical approach to single-molecule experimental design and interpretation.

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Review 4.  Single-molecule fluorescence studies of protein folding and conformational dynamics.

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5.  Using stochastic models calibrated from nanosecond nonequilibrium simulations to approximate mesoscale information.

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Journal:  J Chem Phys       Date:  2009-04-14       Impact factor: 3.488

6.  COCIS: Markov processes in single molecule fluorescence.

Authors:  David S Talaga
Journal:  Curr Opin Colloid Interface Sci       Date:  2007-12-01       Impact factor: 6.448

7.  Chromosomal locus tracking with proper accounting of static and dynamic errors.

Authors:  Mikael P Backlund; Ryan Joyner; W E Moerner
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2015-06-29

8.  Quantifying multiscale noise sources in single-molecule time series.

Authors:  Christopher P Calderon; Nolan C Harris; Ching-Hwa Kiang; Dennis D Cox
Journal:  J Phys Chem B       Date:  2009-01-08       Impact factor: 2.991

9.  Is protein folding sub-diffusive?

Authors:  Sergei V Krivov
Journal:  PLoS Comput Biol       Date:  2010-09-16       Impact factor: 4.475

10.  Coexistence of flexibility and stability of proteins: an equation of state.

Authors:  Marina de Leeuw; Shlomi Reuveni; Joseph Klafter; Rony Granek
Journal:  PLoS One       Date:  2009-10-09       Impact factor: 3.240

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