Literature DB >> 15522454

Wide genome comparisons reveal the origins of the human X chromosome.

Matthias Kohn1, Hildegard Kehrer-Sawatzki, Walther Vogel, Jennifer A M Graves, Horst Hameister.   

Abstract

The eutherian X chromosome has one of the most conserved gene arrangements in mammals. Although earlier comparisons with distantly related mammalian groups pointed towards separate origins for the short and long arms, much deeper comparisons are now possible using draft sequences of the chicken genome, in combination with genome sequences from pufferfish and zebrafish. This enables surprising new insights into the origins of the mammalian X chromosome.

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Year:  2004        PMID: 15522454     DOI: 10.1016/j.tig.2004.09.008

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  33 in total

Review 1.  The origin and evolution of vertebrate sex chromosomes and dosage compensation.

Authors:  A M Livernois; J A M Graves; P D Waters
Journal:  Heredity (Edinb)       Date:  2011-11-16       Impact factor: 3.821

2.  Foreword. Comparative cytogenetics in the genomics era: cytogenomics comes of age.

Authors:  Gauthier Dobigny; Fengtang Yang
Journal:  Chromosome Res       Date:  2008       Impact factor: 5.239

3.  Does the human X contain a third evolutionary block? Origin of genes on human Xp11 and Xq28.

Authors:  Margaret L Delbridge; Hardip R Patel; Paul D Waters; Daniel A McMillan; Jennifer A Marshall Graves
Journal:  Genome Res       Date:  2009-05-13       Impact factor: 9.043

4.  X chromosome-wide analyses of genomic DNA methylation states and gene expression in male and female neutrophils.

Authors:  Yukio Yasukochi; Osamu Maruyama; Milind C Mahajan; Carolyn Padden; Ghia M Euskirchen; Vincent Schulz; Hideki Hirakawa; Satoru Kuhara; Xing-Hua Pan; Peter E Newburger; Michael Snyder; Sherman M Weissman
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-02       Impact factor: 11.205

5.  Allele-specific distribution of RNA polymerase II on female X chromosomes.

Authors:  Katerina S Kucera; Timothy E Reddy; Florencia Pauli; Jason Gertz; Jenae E Logan; Richard M Myers; Huntington F Willard
Journal:  Hum Mol Genet       Date:  2011-07-26       Impact factor: 6.150

6.  Physical map of two tammar wallaby chromosomes: a strategy for mapping in non-model mammals.

Authors:  Janine E Deakin; Edda Koina; Paul D Waters; Ruth Doherty; Vidushi S Patel; Margaret L Delbridge; Bianca Dobson; James Fong; Yanqiu Hu; Cecilia van den Hurk; Andrew J Pask; Geoff Shaw; Carly Smith; Katherine Thompson; Matthew J Wakefield; Hongshi Yu; Marilyn B Renfree; Jennifer A Marshall Graves
Journal:  Chromosome Res       Date:  2008-11-08       Impact factor: 5.239

7.  Mammalian X upregulation is associated with enhanced transcription initiation, RNA half-life, and MOF-mediated H4K16 acetylation.

Authors:  Xinxian Deng; Joel B Berletch; Wenxiu Ma; Di Kim Nguyen; Joseph B Hiatt; William S Noble; Jay Shendure; Christine M Disteche
Journal:  Dev Cell       Date:  2013-03-21       Impact factor: 12.270

Review 8.  The opossum genome: insights and opportunities from an alternative mammal.

Authors:  Paul B Samollow
Journal:  Genome Res       Date:  2008-08       Impact factor: 9.043

9.  Gene synteny comparisons between different vertebrates provide new insights into breakage and fusion events during mammalian karyotype evolution.

Authors:  Claus Kemkemer; Matthias Kohn; David N Cooper; Lutz Froenicke; Josef Högel; Horst Hameister; Hildegard Kehrer-Sawatzki
Journal:  BMC Evol Biol       Date:  2009-04-24       Impact factor: 3.260

10.  Characterisation of inactivation domains and evolutionary strata in human X chromosome through Markov segmentation.

Authors:  Ashwin Kelkar; Vivek Thakur; Ramakrishna Ramaswamy; Deepti Deobagkar
Journal:  PLoS One       Date:  2009-11-25       Impact factor: 3.240

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