Literature DB >> 15520805

Natively unfolded domains in endocytosis: hooks, lines and linkers.

Timothy R Dafforn1, Corinne J I Smith.   

Abstract

It is commonly assumed that a protein must adopt a tertiary structure to achieve its active native state and that regions of a protein that are devoid of alpha-helix or beta-sheet structures are functionally inert. Although extended proline-rich regions are recognized as presenting binding motifs to, for example, Src homology 2 (SH2) and SH3 domains, the idea persists that natively unfolded regions in functional proteins are simply 'spacers' between the folded domains. Such a view has been challenged in recent years and the importance of natively unfolded proteins in biology is now being recognized. In this review, we highlight the role of natively unfolded domains in the field of endocytosis, and show that some important endocytic proteins lack a traditionally folded structure and harbour important binding motifs in their unstructured linker regions.

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Year:  2004        PMID: 15520805      PMCID: PMC1299171          DOI: 10.1038/sj.embor.7400276

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  40 in total

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2.  A clathrin-binding site in the hinge of the beta 2 chain of mammalian AP-2 complexes.

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3.  Intrinsic protein disorder in complete genomes.

Authors:  A K Dunker; Z Obradovic; P Romero; E C Garner; C J Brown
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4.  A role of amphiphysin in synaptic vesicle endocytosis suggested by its binding to dynamin in nerve terminals.

Authors:  C David; P S McPherson; O Mundigl; P de Camilli
Journal:  Proc Natl Acad Sci U S A       Date:  1996-01-09       Impact factor: 11.205

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Authors:  P S McPherson; E P Garcia; V I Slepnev; C David; X Zhang; D Grabs; W S Sossin; R Bauerfeind; Y Nemoto; P De Camilli
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6.  Prediction and functional analysis of native disorder in proteins from the three kingdoms of life.

Authors:  J J Ward; J S Sodhi; L J McGuffin; B F Buxton; D T Jones
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7.  Interaction of tyrosine-based sorting signals with clathrin-associated proteins.

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Journal:  Science       Date:  1995-09-29       Impact factor: 47.728

8.  Structural relationships between clathrin assembly proteins from the Golgi and the plasma membrane.

Authors:  S Ahle; A Mann; U Eichelsbacher; E Ungewickell
Journal:  EMBO J       Date:  1988-04       Impact factor: 11.598

9.  Purification and properties of 100-kd proteins from coated vesicles and their reconstitution with clathrin.

Authors:  B M Pearse; M S Robinson
Journal:  EMBO J       Date:  1984-09       Impact factor: 11.598

10.  Deep-etch visualization of proteins involved in clathrin assembly.

Authors:  J E Heuser; J Keen
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  37 in total

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3.  The amyloidogenic SEVI precursor, PAP248-286, is highly unfolded in solution despite an underlying helical tendency.

Authors:  Jeffrey R Brender; Ravi Prakash Reddy Nanga; Nataliya Popovych; Ronald Soong; Peter M Macdonald; Ayyalusamy Ramamoorthy
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5.  Pan1 is an intrinsically disordered protein with homotypic interactions.

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6.  Molecular Mechanisms of Membrane Curvature Sensing by a Disordered Protein.

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7.  NMR structure in a membrane environment reveals putative amyloidogenic regions of the SEVI precursor peptide PAP(248-286).

Authors:  Ravi P R Nanga; Jeffrey R Brender; Subramanian Vivekanandan; Nataliya Popovych; Ayyalusamy Ramamoorthy
Journal:  J Am Chem Soc       Date:  2009-12-16       Impact factor: 15.419

Review 8.  MACC1 - more than metastasis? Facts and predictions about a novel gene.

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9.  Molecular characterization of the evolution of phagosomes.

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10.  Secretory granule to the nucleus: role of a multiply phosphorylated intrinsically unstructured domain.

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