Literature DB >> 15519577

A high-performance liquid chromatography method for determining transition metal content in proteins.

Anelia Atanassova1, Robert Lam, Deborah B Zamble.   

Abstract

Transition metals are common components of cellular proteins and the detailed study of metalloproteins necessitates the identification and quantification of bound metal ions. Screening for metals is also an informative step in the initial characterization of the numerous unknown and unclassified proteins now coming through the proteomic pipeline. We have developed a high-performance liquid chromatography method for the quantitative determination of the most prevalent biological transition metals: manganese, iron, cobalt, nickel, copper, and zinc. The method is accurate and simple and can be adapted for automated high-throughput studies. The metal analysis involves acid hydrolysis to release the metal ions into solution, followed by ion separation on a mixed-bead ion-exchange column and absorbance detection after postcolumn derivatization with the metallochromic indicator 4-(2-pyridylazo)resorcinol. The potential interferences by common components of protein solutions were investigated. The metal content of a variety of metalloproteins was analyzed and the data were compared to data obtained from inductively coupled plasma-atomic emission spectroscopy. The sensitivity of the assay allows for the detection of 0.1-0.8 nmol, depending on the metal. The amount of protein required is governed by the size of the protein and the fraction of protein with metal bound. For routine analysis 50 microg was used but for many proteins 10 microg would be sufficient. The advantages, disadvantages, and possible applications of this method are discussed.

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Year:  2004        PMID: 15519577     DOI: 10.1016/j.ab.2004.08.013

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  10 in total

1.  NikR-operator complex structure and the mechanism of repressor activation by metal ions.

Authors:  Eric R Schreiter; Sheila C Wang; Deborah B Zamble; Catherine L Drennan
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-31       Impact factor: 11.205

2.  Escherichia coli HypA is a zinc metalloprotein with a weak affinity for nickel.

Authors:  Anelia Atanassova; Deborah B Zamble
Journal:  J Bacteriol       Date:  2005-07       Impact factor: 3.490

Review 3.  Metals in the "omics" world: copper homeostasis and cytochrome c oxidase assembly in a new light.

Authors:  Ivano Bertini; Gabriele Cavallaro
Journal:  J Biol Inorg Chem       Date:  2007-11-07       Impact factor: 3.358

4.  The peptidyl-prolyl isomerase activity of SlyD is not required for maturation of Escherichia coli hydrogenase.

Authors:  Jie Wei Zhang; Michael R Leach; Deborah B Zamble
Journal:  J Bacteriol       Date:  2007-08-24       Impact factor: 3.490

5.  Engagement of the S1, S1' and S2' subsites drives efficient catalysis of peptide bond hydrolysis by the M1-family aminopeptidase from Plasmodium falciparum.

Authors:  Seema Dalal; Daniel R T Ragheb; Michael Klemba
Journal:  Mol Biochem Parasitol       Date:  2012-02-13       Impact factor: 1.759

6.  Effects of metal on the biochemical properties of Helicobacter pylori HypB, a maturation factor of [NiFe]-hydrogenase and urease.

Authors:  Andrew M Sydor; Jenny Liu; Deborah B Zamble
Journal:  J Bacteriol       Date:  2011-01-14       Impact factor: 3.490

7.  Protease digestion analysis of Escherichia coli NikR: evidence for conformational stabilization with Ni(II).

Authors:  Alistair V Dias; Deborah B Zamble
Journal:  J Biol Inorg Chem       Date:  2005-11-02       Impact factor: 3.358

8.  Metal selectivity of the Escherichia coli nickel metallochaperone, SlyD.

Authors:  Harini Kaluarachchi; Judith F Siebel; Supipi Kaluarachchi-Duffy; Sandra Krecisz; Duncan E K Sutherland; Martin J Stillman; Deborah B Zamble
Journal:  Biochemistry       Date:  2011-11-14       Impact factor: 3.162

9.  Structural basis of the metal specificity for nickel regulatory protein NikR.

Authors:  Christine M Phillips; Eric R Schreiter; Yayi Guo; Sheila C Wang; Deborah B Zamble; Catherine L Drennan
Journal:  Biochemistry       Date:  2008-01-15       Impact factor: 3.162

10.  Metal binding properties of Escherichia coli YjiA, a member of the metal homeostasis-associated COG0523 family of GTPases.

Authors:  Andrew M Sydor; Marco Jost; Katherine S Ryan; Kaitlyn E Turo; Colin D Douglas; Catherine L Drennan; Deborah B Zamble
Journal:  Biochemistry       Date:  2013-03-12       Impact factor: 3.162

  10 in total

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