Literature DB >> 15519318

On the role of lipid in colicin pore formation.

Stanislav D Zakharov1, Elena A Kotova, Yuri N Antonenko, William A Cramer.   

Abstract

Insights into the protein-membrane interactions by which the C-terminal pore-forming domain of colicins inserts into membranes and forms voltage-gated channels, and the nature of the colicin channel, are provided by data on: (i) the flexible helix-elongated state of the colicin pore-forming domain in the fluid anionic membrane interfacial layer, the optimum anionic surface charge for channel formation, and voltage-gated translocation of charged regions of the colicin domain across the membrane; (ii) structure-function data on the voltage-gated K(+) channel showing translocation of an arginine-rich helical segment through the membrane; (iii) toroidal channels formed by small peptides that involve local participation of anionic lipids in an inverted phase. It is proposed that translocation of the colicin across the membrane occurs through minimization of the Born charging energy for translocation of positively charged basic residues across the lipid bilayer by neutralization with anionic lipid head groups. The resulting pore structure may consist of somewhat short, ca. 16 residues, trans-membrane helices, in a locally thinned membrane, together with surface elements of inverted phase lipid micelles.

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Year:  2004        PMID: 15519318     DOI: 10.1016/j.bbamem.2004.07.001

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  16 in total

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2.  Free energies of molecular bound states in lipid bilayers: lethal concentrations of antimicrobial peptides.

Authors:  Huey W Huang
Journal:  Biophys J       Date:  2009-04-22       Impact factor: 4.033

3.  Structure of transmembrane pore induced by Bax-derived peptide: evidence for lipidic pores.

Authors:  Shuo Qian; Wangchen Wang; Lin Yang; Huey W Huang
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-05       Impact factor: 11.205

4.  Current fluctuation analysis of the PopB and PopD translocon components of the Pseudomonas aeruginosa type III secretion system.

Authors:  Beau Wager; Eric Faudry; Tyler Wills; Ina Attree; Anne H Delcour
Journal:  Biophys J       Date:  2013-04-02       Impact factor: 4.033

5.  Protein arcs may form stable pores in lipid membranes.

Authors:  Lidia Prieto; Yi He; Themis Lazaridis
Journal:  Biophys J       Date:  2014-01-07       Impact factor: 4.033

6.  Computational studies of colicin insertion into membranes: the closed state.

Authors:  Lidia Prieto; Themis Lazaridis
Journal:  Proteins       Date:  2010-10-12

7.  Interaction of protegrin-1 with lipid bilayers: membrane thinning effect.

Authors:  Hyunbum Jang; Buyong Ma; Thomas B Woolf; Ruth Nussinov
Journal:  Biophys J       Date:  2006-07-21       Impact factor: 4.033

8.  The structures of coiled-coil domains from type III secretion system translocators reveal homology to pore-forming toxins.

Authors:  Michael L Barta; Nicholas E Dickenson; Mrinalini Patil; Andrew Keightley; Gerald J Wyckoff; William D Picking; Wendy L Picking; Brian V Geisbrecht
Journal:  J Mol Biol       Date:  2012-02-01       Impact factor: 5.469

9.  Models of toxic beta-sheet channels of protegrin-1 suggest a common subunit organization motif shared with toxic alzheimer beta-amyloid ion channels.

Authors:  Hyunbum Jang; Buyong Ma; Ratnesh Lal; Ruth Nussinov
Journal:  Biophys J       Date:  2008-08-15       Impact factor: 4.033

10.  Plasma membrane localization of Solanum tuberosum remorin from group 1, homolog 3 is mediated by conformational changes in a novel C-terminal anchor and required for the restriction of potato virus X movement].

Authors:  Artemis Perraki; Jean-Luc Cacas; Jean-Marc Crowet; Laurence Lins; Michel Castroviejo; Sylvie German-Retana; Sébastien Mongrand; Sylvain Raffaele
Journal:  Plant Physiol       Date:  2012-08-01       Impact factor: 8.340

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