Literature DB >> 15518560

Disentangling the web of allosteric communication in a homotetramer: heterotropic activation in phosphofructokinase from Escherichia coli.

Aron W Fenton1, N Monique Paricharttanakul, Gregory D Reinhart.   

Abstract

Phosphofructokinase from Escherichia coli (EcPFK) is a homotetramer with four active sites and four allosteric sites. Understanding the allosteric activation of EcPFK by MgADP has been complicated by the complex web of possible interactions, including active site homotropic interactions, allosteric site homotropic interactions, and heterotropic interactions between active and allosteric sites. The current work has simplified this web of possible interactions to a series of single heterotropic interactions by forming and isolating hybrid tetramers. Each of the four unique heterotropic interactions have independently been isolated and compared to a control that has all four of the unique heterotropic interactions. If the interactions are labeled with the distances between interacting ligands, the 45-A interaction contributes 20% +/- 1%, the 33-A interaction contributes 34% +/- 1%, the 30-A interaction contributes 21% +/- 1%, and the 23-A interaction contributes 25% +/- 1% with respect to the total free energy of MgADP/fructose 6-phosphate (Fru-6-P) activation in the control. The free energies of the isolated interactions sum to 100% +/- 2% of the total. Therefore, the four unique interactions are all contributors to activation, are nonequivalent, and are additive.

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Year:  2004        PMID: 15518560     DOI: 10.1021/bi048569q

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  10 in total

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2.  The effect of introducing small cavities on the allosteric inhibition of phosphofructokinase from Bacillus stearothermophilus.

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4.  Exploring the limits of the usefulness of mutagenesis in studies of allosteric mechanisms.

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5.  Allosteric regulation in phosphofructokinase from the extreme thermophile Thermus thermophilus.

Authors:  Maria S McGresham; Michelle Lovingshimer; Gregory D Reinhart
Journal:  Biochemistry       Date:  2013-12-27       Impact factor: 3.162

6.  Disentangling the web of allosteric communication in a homotetramer: heterotropic inhibition in phosphofructokinase from Escherichia coli.

Authors:  Aron W Fenton; Gregory D Reinhart
Journal:  Biochemistry       Date:  2009-12-29       Impact factor: 3.162

Review 7.  Allostery: an illustrated definition for the 'second secret of life'.

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8.  Kinetic evidence for interdomain communication in the allosteric regulation of alpha-isopropylmalate synthase from Mycobacterium tuberculosis.

Authors:  Luiz Pedro S de Carvalho; Patrick A Frantom; Argyrides Argyrou; John S Blanchard
Journal:  Biochemistry       Date:  2009-03-10       Impact factor: 3.162

9.  Modular architecture of protein structures and allosteric communications: potential implications for signaling proteins and regulatory linkages.

Authors:  Antonio Del Sol; Marcos J Araúzo-Bravo; Dolors Amoros; Ruth Nussinov
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

10.  Orotidine 5'-Monophosphate Decarboxylase: The Operation of Active Site Chains Within and Across Protein Subunits.

Authors:  Tiago A S Brandão; John P Richard
Journal:  Biochemistry       Date:  2020-05-19       Impact factor: 3.162

  10 in total

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