Literature DB >> 15514069

Interval mapping of quantitative trait loci for resistance to late blight [Phytophthora infestans (Mont.) de Bary], height and maturity in a tetraploid population of potato (Solanum tuberosum subsp. tuberosum).

John E Bradshaw1, Barnaly Pande, Glenn J Bryan, Christine A Hackett, Karen McLean, Helen E Stewart, Robbie Waugh.   

Abstract

Interval mapping of quantitative trait loci (QTL) for resistance to late blight, height, and maturity was performed on a tetraploid full-sib family of potato comprising 227 clones from a cross between a susceptible parent, 12601ab1, and a resistant cultivar, Stirling, which were of similar height and main crop maturity. Thirty-eight AFLP primer combinations provided 585 informative markers, and 23 SSRs proved useful for identifying linkage groups (LGs). A simplex QTL allele was found on LGV of Stirling close to marker STM3179, which was associated with early maturity, short plants, and susceptibility to blight and explained 54.7, 26.5, 26.3, and 17.5% of the variation for maturity, height, tuber blight, and foliage blight. When the residuals from the regressions of foliage and tuber blight on maturity were analyzed, there was no significant effect of a QTL on LGV, but a duplex QTL allele for resistance was found on LGIV of Stirling, which explained 30.7 and 13.6% of the variation for foliage and tuber blight on an additive model. Partial dominance for resistance explained even more of the variation, up to 37.2% for foliage blight. A major gene for blight resistance in Stirling was also mapped to LGXI.

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Year:  2004        PMID: 15514069      PMCID: PMC1448831          DOI: 10.1534/genetics.104.030056

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  17 in total

1.  Construction of a genetic linkage map in tetraploid species using molecular markers.

Authors:  Z W Luo; C A Hackett; J E Bradshaw; J W McNicol; D Milbourne
Journal:  Genetics       Date:  2001-03       Impact factor: 4.562

2.  Interval mapping of quantitative trait loci in autotetraploid species.

Authors:  C A Hackett; J E Bradshaw; J W McNicol
Journal:  Genetics       Date:  2001-12       Impact factor: 4.562

3.  A multivalent pairing model of linkage analysis in autotetraploids.

Authors:  S S Wu; R Wu; C X Ma; Z B Zeng; M C Yang; G Casella
Journal:  Genetics       Date:  2001-11       Impact factor: 4.562

4.  Constructing linkage maps in autotetraploid species using simulated annealing.

Authors:  C A Hackett; B Pande; G J Bryan
Journal:  Theor Appl Genet       Date:  2003-02-08       Impact factor: 5.699

5.  A general mixture model for mapping quantitative trait loci by using molecular markers.

Authors:  R C Jansen
Journal:  Theor Appl Genet       Date:  1992-11       Impact factor: 5.699

6.  Use of seedling progeny tests for genetical studies as part of a potato (Solanum tuberosum subsp. tuberosum) breeding programme.

Authors:  J E Bradshaw; H E Stewart; R L Wastie; M F Dale; M S Phillips
Journal:  Theor Appl Genet       Date:  1995-05       Impact factor: 5.699

7.  AFLP: a new technique for DNA fingerprinting.

Authors:  P Vos; R Hogers; M Bleeker; M Reijans; T van de Lee; M Hornes; A Frijters; J Pot; J Peleman; M Kuiper
Journal:  Nucleic Acids Res       Date:  1995-11-11       Impact factor: 16.971

8.  Linkage analysis in tetraploid potato and association of markers with quantitative resistance to late blight (Phytophthora infestans).

Authors:  R C Meyer; D Milbourne; C A Hackett; J E Bradshaw; J W McNichol; R Waugh
Journal:  Mol Gen Genet       Date:  1998-08

9.  QTL analysis in a complex autopolyploid: genetic control of sugar content in sugarcane.

Authors:  R Ming; S C Liu; P H Moore; J E Irvine; A H Paterson
Journal:  Genome Res       Date:  2001-12       Impact factor: 9.043

10.  R6 and R7 alleles of potato conferring race-specific resistance to Phytophthora infestans (Mont.) de Bary identified genetic loci clustering with the R3 locus on chromosome XI.

Authors:  A El-Kharbotly; C Palomino-Sánchez; F Salamini; E Jacobsen; C Gebhardt
Journal:  Theor Appl Genet       Date:  1996-05       Impact factor: 5.699

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  37 in total

1.  QTL mapping of internal heat necrosis in tetraploid potato.

Authors:  P H McCord; B R Sosinski; K G Haynes; M E Clough; G C Yencho
Journal:  Theor Appl Genet       Date:  2010-08-28       Impact factor: 5.699

2.  Mapping the R10 and R11 genes for resistance to late blight (Phytophthora infestans) present in the potato (Solanum tuberosum) R-gene differentials of black.

Authors:  John E Bradshaw; Glenn J Bryan; Alison K Lees; Karen McLean; Ruth M Solomon-Blackburn
Journal:  Theor Appl Genet       Date:  2006-01-05       Impact factor: 5.699

3.  Constructing genetic linkage maps under a tetrasomic model.

Authors:  Z W Luo; Ze Zhang; Lindsey Leach; R M Zhang; John E Bradshaw; M J Kearsey
Journal:  Genetics       Date:  2006-01-16       Impact factor: 4.562

4.  Construction of a 10,000-marker ultradense genetic recombination map of potato: providing a framework for accelerated gene isolation and a genomewide physical map.

Authors:  Hans van Os; Sandra Andrzejewski; Erin Bakker; Imanol Barrena; Glenn J Bryan; Bernard Caromel; Bilal Ghareeb; Edwige Isidore; Walter de Jong; Paul van Koert; Véronique Lefebvre; Dan Milbourne; Enrique Ritter; Jeroen N A M Rouppe van der Voort; Françoise Rousselle-Bourgeois; Joke van Vliet; Robbie Waugh; Richard G F Visser; Jaap Bakker; Herman J van Eck
Journal:  Genetics       Date:  2006-04-02       Impact factor: 4.562

5.  REML approach for adjusting the Fusarium head blight rating to a phenological date in inoculated selection experiments of wheat.

Authors:  K Emrich; F Wilde; T Miedaner; H P Piepho
Journal:  Theor Appl Genet       Date:  2008-04-05       Impact factor: 5.699

6.  Identification of agronomically important QTL in tetraploid potato cultivars using a marker-trait association analysis.

Authors:  Björn B D'hoop; Paul L C Keizer; M João Paulo; Richard G F Visser; Fred A van Eeuwijk; Herman J van Eck
Journal:  Theor Appl Genet       Date:  2014-01-10       Impact factor: 5.699

7.  The novel, major locus Rpi-phu1 for late blight resistance maps to potato chromosome IX and is not correlated with long vegetation period.

Authors:  J Sliwka; H Jakuczun; R Lebecka; W Marczewski; C Gebhardt; E Zimnoch-Guzowska
Journal:  Theor Appl Genet       Date:  2006-07-12       Impact factor: 5.699

8.  The Double-Reduction Landscape in Tetraploid Potato as Revealed by a High-Density Linkage Map.

Authors:  Peter M Bourke; Roeland E Voorrips; Richard G F Visser; Chris Maliepaard
Journal:  Genetics       Date:  2015-09-15       Impact factor: 4.562

9.  QTL mapping in autotetraploids using SNP dosage information.

Authors:  Christine A Hackett; John E Bradshaw; Glenn J Bryan
Journal:  Theor Appl Genet       Date:  2014-07-01       Impact factor: 5.699

10.  Assignment of genetic linkage maps to diploid Solanum tuberosum pachytene chromosomes by BAC-FISH technology.

Authors:  Xiaomin Tang; Jan M de Boer; Herman J van Eck; Christian Bachem; Richard G F Visser; Hans de Jong
Journal:  Chromosome Res       Date:  2009-09-23       Impact factor: 5.239

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