Literature DB >> 15510168

How did alternative splicing evolve?

Gil Ast1.   

Abstract

Alternative splicing creates transcriptome diversification, possibly leading to speciation. A large fraction of the protein-coding genes of multicellular organisms are alternatively spliced, although no regulated splicing has been detected in unicellular eukaryotes such as yeasts. A comparative analysis of unicellular and multicellular eukaryotic 5' splice sites has revealed important differences - the plasticity of the 5' splice sites of multicellular eukaryotes means that these sites can be used in both constitutive and alternative splicing, and for the regulation of the inclusion/skipping ratio in alternative splicing. So, alternative splicing might have originated as a result of relaxation of the 5' splice site recognition in organisms that originally could support only constitutive splicing.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15510168     DOI: 10.1038/nrg1451

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  239 in total

1.  Divergence of duplicate genes in exon-intron structure.

Authors:  Guixia Xu; Chunce Guo; Hongyan Shan; Hongzhi Kong
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-09       Impact factor: 11.205

2.  Changes in exon-intron structure during vertebrate evolution affect the splicing pattern of exons.

Authors:  Sahar Gelfman; David Burstein; Osnat Penn; Anna Savchenko; Maayan Amit; Schraga Schwartz; Tal Pupko; Gil Ast
Journal:  Genome Res       Date:  2011-10-05       Impact factor: 9.043

3.  Functional implications of the emergence of alternative splicing in hnRNP A/B transcripts.

Authors:  Siew Ping Han; Karin S Kassahn; Adam Skarshewski; Mark A Ragan; Joseph A Rothnagel; Ross Smith
Journal:  RNA       Date:  2010-07-22       Impact factor: 4.942

4.  Chromatin density and splicing destiny: on the cross-talk between chromatin structure and splicing.

Authors:  Schraga Schwartz; Gil Ast
Journal:  EMBO J       Date:  2010-04-20       Impact factor: 11.598

Review 5.  Alternative splicing and evolution: diversification, exon definition and function.

Authors:  Hadas Keren; Galit Lev-Maor; Gil Ast
Journal:  Nat Rev Genet       Date:  2010-04-08       Impact factor: 53.242

Review 6.  Understanding protein non-folding.

Authors:  Vladimir N Uversky; A Keith Dunker
Journal:  Biochim Biophys Acta       Date:  2010-02-01

7.  Alternative splicing studies of the reactive oxygen species gene network in Populus reveal two isoforms of high-isoelectric-point superoxide dismutase.

Authors:  Vaibhav Srivastava; Manoj Kumar Srivastava; Kamel Chibani; Robert Nilsson; Nicolas Rouhier; Michael Melzer; Gunnar Wingsle
Journal:  Plant Physiol       Date:  2009-01-28       Impact factor: 8.340

8.  U1 small nuclear RNA variants differentially form ribonucleoprotein particles in vitro.

Authors:  Jason A Somarelli; Annia Mesa; Carol E Rodriguez; Shalini Sharma; Rene J Herrera
Journal:  Gene       Date:  2014-02-26       Impact factor: 3.688

9.  A genome-wide aberrant RNA splicing in patients with acute myeloid leukemia identifies novel potential disease markers and therapeutic targets.

Authors:  Sophia Adamia; Benjamin Haibe-Kains; Patrick M Pilarski; Michal Bar-Natan; Samuel Pevzner; Herve Avet-Loiseau; Laurence Lode; Sigitas Verselis; Edward A Fox; John Burke; Ilene Galinsky; Ibiayi Dagogo-Jack; Martha Wadleigh; David P Steensma; Gabriela Motyckova; Daniel J Deangelo; John Quackenbush; Richard Stone; James D Griffin
Journal:  Clin Cancer Res       Date:  2013-11-27       Impact factor: 12.531

10.  Mathematical modeling identifies potential gene structure determinants of co-transcriptional control of alternative pre-mRNA splicing.

Authors:  Jeremy Davis-Turak; Tracy L Johnson; Alexander Hoffmann
Journal:  Nucleic Acids Res       Date:  2018-11-16       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.