Literature DB >> 15508154

"Squashing peanuts and smashing pumpkins": how noise distorts diffusion-weighted MR data.

Derek K Jones1, Peter J Basser.   

Abstract

New diffusion-weighted imaging (DWI) methods, including high-b, q-space, and high angular resolution MRI methods, attempt to extract information about non-Gaussian diffusion in tissue that is not provided by low-b-value (b approximately 1000 s mm(-2)) diffusion or diffusion tensor magnetic resonance imaging (DT-MRI). Additionally, DWI data with higher spatial resolution are being acquired to resolve fine anatomic structures, such as white matter fasciculi. Increasing diffusion-weighting or decreasing voxel size can reduce the signal-to-noise ratio so that some DWI signals are close to the background noise level. Here we report several new artifacts that can be explained by considering how background noise affects the peanut-shaped angular apparent diffusion coefficient (ADC) profile. These include an orientationally dependent deviation from Gaussian behavior of the ADC profile, an underestimation of indices of diffusion anisotropy, and a correlation between estimates of mean diffusivity and diffusion anisotropy. We also discuss how noise can cause increased gray/white matter DWI contrast at higher b values and an apparent elevation of diffusion anisotropy in acute ischemia. Importantly, all of these artifacts are negligible in the b-value range typically used in DT-MRI of brain (b approximately 1000 s mm(-2)). Finally, we demonstrate a strategy for ameliorating the rectified noise artifact in data collected at higher b values. (c) 2004 Wiley-Liss, Inc.

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Mesh:

Year:  2004        PMID: 15508154     DOI: 10.1002/mrm.20283

Source DB:  PubMed          Journal:  Magn Reson Med        ISSN: 0740-3194            Impact factor:   4.668


  195 in total

1.  Assessment of bias for MRI diffusion tensor imaging using SIMEX.

Authors:  Carolyn B Lauzon; Andrew J Asman; Ciprian Crainiceanu; Brian C Caffo; Bennett A Landman
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2.  Diffusion MRI noise mapping using random matrix theory.

Authors:  Jelle Veraart; Els Fieremans; Dmitry S Novikov
Journal:  Magn Reson Med       Date:  2015-11-24       Impact factor: 4.668

3.  Sex differences in network controllability as a predictor of executive function in youth.

Authors:  Eli J Cornblath; Evelyn Tang; Graham L Baum; Tyler M Moore; Azeez Adebimpe; David R Roalf; Ruben C Gur; Raquel E Gur; Fabio Pasqualetti; Theodore D Satterthwaite; Danielle S Bassett
Journal:  Neuroimage       Date:  2018-12-01       Impact factor: 6.556

4.  Geometrically constrained two-tensor model for crossing tracts in DWI.

Authors:  Sharon Peled; Ola Friman; Ferenc Jolesz; Carl-Fredrik Westin
Journal:  Magn Reson Imaging       Date:  2006-09-12       Impact factor: 2.546

5.  Denoising of diffusion MRI using random matrix theory.

Authors:  Jelle Veraart; Dmitry S Novikov; Daan Christiaens; Benjamin Ades-Aron; Jan Sijbers; Els Fieremans
Journal:  Neuroimage       Date:  2016-08-11       Impact factor: 6.556

6.  Human brain functional MRI and DTI visualization with virtual reality.

Authors:  Bin Chen; John Moreland; Jingyu Zhang
Journal:  Quant Imaging Med Surg       Date:  2011-12

7.  Effects of image noise in muscle diffusion tensor (DT)-MRI assessed using numerical simulations.

Authors:  Bruce M Damon
Journal:  Magn Reson Med       Date:  2008-10       Impact factor: 4.668

8.  Uncertainty estimation in diffusion MRI using the nonlocal bootstrap.

Authors:  Pew-Thian Yap; Hongyu An; Yasheng Chen; Dinggang Shen
Journal:  IEEE Trans Med Imaging       Date:  2014-04-29       Impact factor: 10.048

9.  Quantifying the impact of underlying measurement error on cervical spinal cord diffusion tensor imaging at 3T.

Authors:  Samantha By; Alex K Smith; Lindsey M Dethrage; Bailey D Lyttle; Bennett A Landman; Jeffrey L Creasy; Siddharama Pawate; Seth A Smith
Journal:  J Magn Reson Imaging       Date:  2016-05-18       Impact factor: 4.813

10.  Surface based analysis of diffusion orientation for identifying architectonic domains in the in vivo human cortex.

Authors:  Jennifer A McNab; Jonathan R Polimeni; Ruopeng Wang; Jean C Augustinack; Kyoko Fujimoto; Allison Stevens; Christina Triantafyllou; Thomas Janssens; Reza Farivar; Rebecca D Folkerth; Wim Vanduffel; Lawrence L Wald
Journal:  Neuroimage       Date:  2012-12-16       Impact factor: 6.556

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