Literature DB >> 15498455

Complementation of replication origin function in mouse embryonic stem cells by human DNA sequences.

Stephanie M Cohen1, Seigo Hatada, Bruna P Brylawski, Oliver Smithies, David G Kaufman, Marila Cordeiro-Stone.   

Abstract

A functional origin of replication was mapped to the transcriptional promoter and exon 1 of the hypoxanthine-guanine phosphoribosyltransferase (HPRT) gene in the mouse and human genomes. This origin was lost in mouse embryonic stem (ES) cells with a spontaneous deletion (approximately 36 kb) at the 5' end of the HPRT locus. Restoration of HPRT activity by homologous recombination with human/mouse chimeric sequences reconstituted replication origin activity in two independent ES cell lines. Quantitative PCR analyses of abundance of genetic markers in size-fractionated nascent DNA indicated that initiation of DNA replication coincided with the site of insertion in the mouse genome of the 335 bp of human DNA containing the HPRT exon 1 and a truncated promoter. The genetic information contained in the human sequence and surrounding mouse DNA was analyzed for cis-acting elements that might contribute to selection and functional activation of a mammalian origin of DNA replication.

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Year:  2004        PMID: 15498455     DOI: 10.1016/j.ygeno.2004.04.008

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  5 in total

Review 1.  Early S phase DNA replication: a search for targets of carcinogenesis.

Authors:  David G Kaufman; Marila Cordeiro-Stone; Bruna P Brylawski; Stephanie M Cohen; Paul D Chastain
Journal:  Adv Enzyme Regul       Date:  2006-12-28

2.  Genome-wide depletion of replication initiation events in highly transcribed regions.

Authors:  Melvenia M Martin; Michael Ryan; RyangGuk Kim; Anna L Zakas; Haiqing Fu; Chii Mei Lin; William C Reinhold; Sean R Davis; Sven Bilke; Hongfang Liu; James H Doroshow; Mark A Reimers; Manuel S Valenzuela; Yves Pommier; Paul S Meltzer; Mirit I Aladjem
Journal:  Genome Res       Date:  2011-08-03       Impact factor: 9.043

3.  Mapping of DNA replication origins to noncoding genes of the X-inactivation center.

Authors:  Rebecca K Rowntree; Jeannie T Lee
Journal:  Mol Cell Biol       Date:  2006-05       Impact factor: 4.272

4.  HBO1 histone acetylase is a coactivator of the replication licensing factor Cdt1.

Authors:  Benoit Miotto; Kevin Struhl
Journal:  Genes Dev       Date:  2008-10-01       Impact factor: 12.890

5.  Transcription initiation activity sets replication origin efficiency in mammalian cells.

Authors:  Joana Sequeira-Mendes; Ramón Díaz-Uriarte; Anwyn Apedaile; Derek Huntley; Neil Brockdorff; María Gómez
Journal:  PLoS Genet       Date:  2009-04-10       Impact factor: 5.917

  5 in total

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