| Literature DB >> 15496242 |
John F Bohnsack1, April A Whiting, Gabriela Martinez, Nicola Jones, Elisabeth E Adderson, Shauna Detrick, Anne J Blaschke-Bonkowsky, Naiel Bisharat, Marcelo Gottschalk.
Abstract
Streptococcus agalactiae (group B streptococcus [GBS]) causes invasive human infections and bovine mastitis. This study examined the genetic relationship between bovine and human serotype III GBS by using molecular techniques that classify human serotype III GBS into four distinct phylogenetic lineages. Bovine serotype III GBS were largely contained in two lineages, which are distinct from the two major lineages (restriction digest types III-2 and III-3) that infect human neonates. One of the bovine lineages closely resembles the human III-1 lineage, whose members occasionally cause human neonatal infections. The bovine strains in the other lineage characteristically have an initiation factor IF2 gene (infB) H allele and multilocus sequence types that are not found in human GBS strains. Evidence suggests that this "H allele" lineage is related to the human III-3 lineage. These results support the assertion that human and bovine GBS are largely unrelated and provide further insight into the genetic relation between human and bovine GBS.Entities:
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Year: 2004 PMID: 15496242 PMCID: PMC3320405 DOI: 10.3201/eid1008.030917
Source DB: PubMed Journal: Emerg Infect Dis ISSN: 1080-6040 Impact factor: 6.883
FigureSimplified dendrograms illustrating the genetic relationship between human and bovine group B streptococcus. A) Dendrogram of Quebec sample derived by randomly amplified polymorphic DNA (RAPD) analysis; adapted from (7). All RAPD groups contain bovine serotype III GBS, but those marked by an asterisk also contain human isolates (see Table 2). B) Dendrogram of human restriction digest pattern types (RDP) of serotype III GBS derived by analysis of RDP of genomic DNA created by digestion with restriction enzyme Sse83871; adapted from (11).
Distribution of infB alleles in serotype III GBS from different RAPD groupsa
| RAPD groupb | Species of origin | Isolates studied | |||||
|---|---|---|---|---|---|---|---|
| A | B | C | D | H | |||
| II | Bovine | 31 | 1 | 0 | 0 | 0 | 30 |
| III | Bovine | 4 | 3 | 0 | 0 | 1 | 0 |
| IV-A | Bovine | 19 | 19 | 0 | 0 | 0 | 0 |
| Human | 1 | 1 | 0 | 0 | 0 | 0 | |
| IV-B | Bovine | 2 | 0 | 0 | 0 | 0 | 2 |
| IV-C | Bovine | 4 | 2 | 0 | 2 | 0 | 0 |
| Human | 7 | 5 | 0 | 2 | 0 | 0 | |
| Ungrouped | Bovine | 2 | 0 | 0 | 0 | 0 | 2 |
| Total | 70 | 31 | 0 | 4 | 1 | 34 | |
aGBS, group B streptococcus. bRAPD group identified by randomly amplified polymorphic DNA analysis.
Characteristics of human serotype III GBS lineagesa
| RDP typec | Inserted sequence sitesb | ||||
|---|---|---|---|---|---|
| AW-10 |
|
| STe | ||
| III-1 | A | No insert | No insert | No insert | 23, 25 |
| III-2 | A | No insert | IS | IS | 19, 21 |
| III-3 | C | GBSi1 | No insert | GBSi1 | 17, 29 |
| III-4 | A | No insert | No insert | GBSi1 | 1 |
aGBS, group B streptococcus. bThe presence of inserted sequences is determined at the three chromosomal locations (see Methods). cRDP type refers to phylogenetic lineages originally defined by analysis of restriction digest patterns of chromosomal DNA. dinfB is the highly conserved gene encoding initiation-translation factor IF2. eST refers to the isolates' sequence type, based on the alleles of seven housekeeping genes identified by multilocus sequence typing.
Inserted sequences and sequence type (ST) of bovine strains containing the infB A allelea
| RAPD group | Isolate | Origin | Inserted sequence site | ||||
|---|---|---|---|---|---|---|---|
| AW-10 |
|
| ST | RDP type | |||
| II | SH-96-3696 | Bovine | 3,400b | None | None | 67 | Unknownc |
| III | NI-96-2836 | Bovine | None | IS | IS | 19 | III-2-like |
| SH-96-4807 | Bovine | None | None | None | 17 | III-3-like | |
| RF-96-2997 | Bovine | None | None | None | 94 | III-1 | |
| IV-A | 1003A | Human | None | IS | IS | 19 | III-2 |
| AL-97-0498 SH-96-3417 | Bovine | None | None | None | 23 | III-1 | |
| All 17 others | Bovine | None | None | No productd | 23,90,92 | III-1-like | |
| IV-C | NI-96-3213 | Bovine | None | None | No productd | 23 | III-1-like |
| ASS-96-666 | Bovine | None | None | No productd | 23 | III-1-like | |
| 1007B | Human | None | IS | IS | 86 | III-2 | |
| 1009A, 15888 | Human | None | IS | IS | 19 | III-2 | |
| 13228, 1009B | Human | None | IS | IS | 19 | III-2 | |
aRAPD, randomly amplified polymorphic DNA; RDP, restriction digest pattern. bA 3,400-bp insert is also found in other strains from randomly amplified polymorphic DNA (RAPD) group II (see text and Table 5). cThis strain appears to be related to the H allele strains described in Table 5. dNo polymerase chain reaction product was produced from these strains in multiple attempts. eIn this strain, the insertion sequence IS1381 is upstream from IS1548 in the scpb-lmb locus. fS1548 in the hylB locus is missing 657 bp from the 3´ end of its open reading frame in this strain.
Inserted sequences and sequence types of infB H allele strainsa
| RAPD | Isolate | Size of PCR product from inserted sequence sites (bp) | |||
|---|---|---|---|---|---|
| AW-10 |
|
| ST | ||
| II | RF-96-2834 | 3,000b | 700c | 650d | 61 |
| ASS-97-0701 | 3,000 | 700 | 650 | 61 | |
| AL-96-1653 | 1,700e | 700 | 650 | 61 | |
| SF-96-6312 | 3,400f | 700 | 650 | 61g | |
| SF-96-4396 | 1,700 | 700 | 650 | 91 | |
| NI-96-2521 | 3,000 | 700 | 650 | 105 | |
| IV-B | ASS-96-659 | 3,000 | 700 | No product | 61g |
| SH-96-5461 | 1,700 | 700 | No product | 61 | |
| Ungrouped | AL-96-2049 | 3,000 | 700 | 650 | 61 |
| NI-96-3329 | 3,000 | 700 | 650 | 61 | |
aRAPD, randomly amplified polymorphic DNA; ST, sequence type. bA 3,000-bp amplicon was sequenced and found to contain an IS3-like insertion sequence interrupting GBSi1. cA 700-bp product from the hylB site indicates that there is no inserted sequence in the site. dA 650-bp product from the scpb-lmb site indicates that there is no inserted sequence in the site. eA 1,700-bp product was amplified and found to contain an intact copy of GBSi1. fA 3,400-bp amplicon was sequenced and found to contain GBSi1 and an IS1563-like insertion sequence. gThe glcK (glucose kinase) gene in these two strains contains a mobile genetic element in the portion of glcK used to determine the ST of GBS strains. These two strains were found to be sequence type 61 (ST-61) after the inserted sequence was removed. The identical inserted sequence in the glcK gene has been found in other ST-61 bovine strains and is described elsewhere (21).
Analysis of inserted sequences of strains containing the infB C allelea
| RAPD | Isolate | Inserted sequence site | |||||
|---|---|---|---|---|---|---|---|
| Origin | AW-10 |
|
| ST | RDP type | ||
| IV-C | SF 96-5547 | Bovine | GBSi1 | 700 | GBSi1 | 17 | III-3 |
| 1004A | Human | GBSi1 | 700 | IS | 17 | III-3 | |
| 1000B | Human | GBSi1 | 700 | GBSi1 | 17 | III-3 | |
| SF-96-4054 | Bovine | GBSi1 | 700 | GBSi1 | 17 | III-3 | |
aRAPD, randomly amplified polymorphic DNA; ST, sequence type; RDP, restriction digest pattern. bAn insert highly homologous to IS1548 but lacking bp 603–1,301 was found in this strain. IS1548 has not previously been found in this locus in III-3 strains.
Distribution of III-3–specific sequence tags
| III-3–specific sequence | |||
|---|---|---|---|
| H | A | C | |
| DY-1 | 10/10 | 0/10 | 3/3 |
| DY-3 | 2/10 | 1/10 | 3/3 |
| DY-11 | 7/10 | 0/10 | 3/3 |
| AA 3.8 | 10/10 | 2/10 | 3/3 |
| AA 3.14 | 10/10 | 0/10 | 3/3 |
| AA 3.16 | 9/10 | 1/10 | 3/3 |
| AA 4.1 | 10/10 | 2/10 | 3/3 |
| AA 4.13 | 10/10 | 0/10 | 3/3 |
aNumber of strains with sequence tag by DNA hybridization/number of strains tested.
Similarities and differences between the two major bovine lineages and related human lineages
| Bovine lineage | Human lineage | Similarities | Differences |
|---|---|---|---|
| III-1 | III-1 | Same | Many bovine III-1 strains lack |
| H allele | III-3 | GBSi1 inserted in AW-10 site
No inserted sequence in | Different |