Literature DB >> 15491121

Phosphoryl transfer enzymes and hypervalent phosphorus chemistry.

Robert R Holmes1.   

Abstract

The coordination tendencies of phosphorus to form a hexacoordinated state from a pentacoordinated state, which might assist in describing the mechanistic action of phosphoryl transfer enzymes, are delineated. The factors discussed include substrate and transition or intermediate state anionicity, hydrogen bonding, packing effects, that is, van der Waals forces, the ease of formation of hexacoordinate phosphorus from lower coordinate states, and the pseudorotation problem common to nonrigid pentacoordinate phosphorus. In view of the work reported in this Account and recent work on enzyme promiscuity and moonlighting activities, it is suggested that donor action should play a role in determining active site interactions in phosphoryl transfer enzyme mechanisms.

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Year:  2004        PMID: 15491121     DOI: 10.1021/ar040053b

Source DB:  PubMed          Journal:  Acc Chem Res        ISSN: 0001-4842            Impact factor:   22.384


  6 in total

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Authors:  Alvan C Hengge
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-11       Impact factor: 11.205

2.  Proton shuttles and phosphatase activity in soluble epoxide hydrolase.

Authors:  Marco De Vivo; Bernd Ensing; Matteo Dal Peraro; German A Gomez; David W Christianson; Michael L Klein
Journal:  J Am Chem Soc       Date:  2007-01-17       Impact factor: 15.419

3.  Theoretical investigation of the enzymatic phosphoryl transfer of β-phosphoglucomutase: revisiting both steps of the catalytic cycle.

Authors:  Brigitta Elsässer; Silvia Dohmeier-Fischer; Gregor Fels
Journal:  J Mol Model       Date:  2012-01-12       Impact factor: 1.810

4.  Phosphodiester cleavage in ribonuclease H occurs via an associative two-metal-aided catalytic mechanism.

Authors:  Marco De Vivo; Matteo Dal Peraro; Michael L Klein
Journal:  J Am Chem Soc       Date:  2008-07-29       Impact factor: 15.419

5.  Unraveling the three-metal-ion catalytic mechanism of the DNA repair enzyme endonuclease IV.

Authors:  Ivaylo Ivanov; John A Tainer; J Andrew McCammon
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-22       Impact factor: 11.205

6.  Nucleophilic Substitution in Solution: Activation Strain Analysis of Weak and Strong Solvent Effects.

Authors:  Trevor A Hamlin; Bas van Beek; Lando P Wolters; F Matthias Bickelhaupt
Journal:  Chemistry       Date:  2018-03-24       Impact factor: 5.236

  6 in total

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