Literature DB >> 15489512

Chromosome identification and nomenclature of Sorghum bicolor.

Jeong-Soon Kim1, Patricia E Klein, Robert R Klein, H James Price, John E Mullet, David M Stelly.   

Abstract

Linkage group identities and homologies were determined for metaphase chromosomes of Sorghum bicolor (2n = 20) by FISH of landed BACs. Relative lengths of chromosomes in FISH-karyotyped metaphase spreads of the elite inbred BTx623 were used to estimate the molecular size of each chromosome and to establish a size-based nomenclature for sorghum chromosomes (SBI-01-SBI-10) and linkage groups (LG-01 to LG-10). Lengths of arms were determined to orient linkage groups relative to a standard karyotypic layout (short arms at top). The size-based nomenclature for BTx623 represents a reasonable choice as the standard for a unified chromosome nomenclature for use by the sorghum research community.

Entities:  

Mesh：

Substances：

Year:  2004        PMID： 15489512      PMCID： PMC1449135          DOI： 10.1534/genetics.104.035980

Source DB:  PubMed          Journal:  Genetics        ISSN： 0016-6731            Impact factor:   4.562


  27 in total

1.  A RFLP linkage map of Sorghum bicolor (L.) Moench.

Authors:  G W Xu; C W Magill; K F Schertz; G E Hart
Journal:  Theor Appl Genet       Date:  1994-10       Impact factor: 5.699

2.  Mapping of post-flowering drought resistance traits in grain sorghum: association between QTLs influencing premature senescence and maturity.

Authors:  O R Crasta; W W Xu; D T Rosenow; J Mullet; H T Nguyen
Journal:  Mol Gen Genet       Date:  1999-10

3.  Integration of the FISH pachytene and genetic maps of Medicago truncatula.

Authors:  O Kulikova; G Gualtieri; R Geurts; D J Kim; D Cook; T Huguet; J H de Jong; P F Fransz; T Bisseling
Journal:  Plant J       Date:  2001-07       Impact factor: 6.417

4.  A high-throughput AFLP-based method for constructing integrated genetic and physical maps: progress toward a sorghum genome map.

Authors:  P E Klein; R R Klein; S W Cartinhour; P E Ulanch; J Dong; J A Obert; D T Morishige; S D Schlueter; K L Childs; M Ale; J E Mullet
Journal:  Genome Res       Date:  2000-06       Impact factor: 9.043

5.  Comparative physical mapping of the 18S-5.8S-26S rDNA in three sorghum species.

Authors:  Y Sang; G H Liang
Journal:  Genome       Date:  2000-10       Impact factor: 2.166

6.  A detailed RFLP map of Sorghum bicolor x S. propinquum, suitable for high-density mapping, suggests ancestral duplication of Sorghum chromosomes or chromosomal segments.

Authors:  L M Chittenden; K F Schertz; Y R Lin; R A Wing; A H Paterson
Journal:  Theor Appl Genet       Date:  1994-03       Impact factor: 5.699

7.  Integration of the cytogenetic and genetic linkage maps of Brassica oleracea.

Authors:  Elaine C Howell; Guy C Barker; Gareth H Jones; Michael J Kearsey; Graham J King; Erik P Kop; Carol D Ryder; Graham R Teakle; Joana G Vicente; Susan J Armstrong
Journal:  Genetics       Date:  2002-07       Impact factor: 4.562

8.  High-resolution crossover maps for each bivalent of Zea mays using recombination nodules.

Authors:  Lorinda K Anderson; Gregory G Doyle; Brian Brigham; Jenna Carter; Kristina D Hooker; Ann Lai; Mindy Rice; Stephen M Stack
Journal:  Genetics       Date:  2003-10       Impact factor: 4.562

9.  Toward a cytogenetically based physical map of the wheat genome.

Authors:  J E Werner; T R Endo; B S Gill
Journal:  Proc Natl Acad Sci U S A       Date:  1992-12-01       Impact factor: 11.205

10.  Comparative genome mapping of Sorghum and maize.

Authors:  R Whitkus; J Doebley; M Lee
Journal:  Genetics       Date:  1992-12       Impact factor: 4.562
View more
  44 in total

1.  QTL for nodal root angle in sorghum (Sorghum bicolor L. Moench) co-locate with QTL for traits associated with drought adaptation.

Authors:  E S Mace; V Singh; E J Van Oosterom; G L Hammer; C H Hunt; D R Jordan
Journal:  Theor Appl Genet       Date:  2011-09-22       Impact factor: 5.699

2.  Studying the genetic basis of drought tolerance in sorghum by managed stress trials and adjustments for phenological and plant height differences.

Authors:  P K Sabadin; M Malosetti; M P Boer; F D Tardin; F G Santos; C T Guimarães; R L Gomide; C L T Andrade; P E P Albuquerque; F F Caniato; M Mollinari; G R A Margarido; B F Oliveira; R E Schaffert; A A F Garcia; F A van Eeuwijk; J V Magalhaes
Journal:  Theor Appl Genet       Date:  2012-05       Impact factor: 5.699

Review 3.  Toward sequencing the sorghum genome. A U.S. National Science Foundation-sponsored workshop report.

Authors: 
Journal:  Plant Physiol       Date:  2005-08       Impact factor: 8.340

4.  Comprehensive molecular cytogenetic analysis of sorghum genome architecture: distribution of euchromatin, heterochromatin, genes and recombination in comparison to rice.

Authors:  J-S Kim; M N Islam-Faridi; P E Klein; D M Stelly; H J Price; R R Klein; J E Mullet
Journal:  Genetics       Date:  2005-09-02       Impact factor: 4.562

5.  Comparative physical mapping links conservation of microsynteny to chromosome structure and recombination in grasses.

Authors:  John E Bowers; Miguel A Arias; Rochelle Asher; Jennifer A Avise; Robert T Ball; Gene A Brewer; Ryan W Buss; Amy H Chen; Thomas M Edwards; James C Estill; Heather E Exum; Valorie H Goff; Kristen L Herrick; Cassie L James Steele; Santhosh Karunakaran; Gmerice K Lafayette; Cornelia Lemke; Barry S Marler; Shelley L Masters; Joana M McMillan; Lisa K Nelson; Graham A Newsome; Chike C Nwakanma; Rosana N Odeh; Cynthia A Phelps; Elizabeth A Rarick; Carl J Rogers; Sean P Ryan; Keimun A Slaughter; Carol A Soderlund; Haibao Tang; Rod A Wing; Andrew H Paterson
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-02       Impact factor: 11.205

6.  Development of genic-microsatellite markers for sorghum staygreen QTL using a comparative genomic approach with rice.

Authors:  G Srinivas; K Satish; S Murali Mohan; R Nagaraja Reddy; R Madhusudhana; D Balakrishna; B Venkatesh Bhat; C J Howarth; N Seetharama
Journal:  Theor Appl Genet       Date:  2008-04-26       Impact factor: 5.699

7.  Molecular cytogenetic maps of sorghum linkage groups 2 and 8.

Authors:  Jeong-Soon Kim; Patricia E Klein; Robert R Klein; H James Price; John E Mullet; David M Stelly
Journal:  Genetics       Date:  2004-10-16       Impact factor: 4.562

8.  Fertility restorer locus Rf1 [corrected] of sorghum (Sorghum bicolor L.) encodes a pentatricopeptide repeat protein not present in the colinear region of rice chromosome 12.

Authors:  R R Klein; P E Klein; J E Mullet; P Minx; W L Rooney; K F Schertz
Journal:  Theor Appl Genet       Date:  2005-08-03       Impact factor: 5.699

9.  Molecular mapping and characterization of BLMC, a locus for profuse wax (bloom) and enhanced cuticular features of Sorghum (Sorghum bicolor (L.) Moench.).

Authors:  Gloria B Burow; Cleve D Franks; Veronica Acosta-Martinez; Zhanguo Xin
Journal:  Theor Appl Genet       Date:  2008-11-05       Impact factor: 5.699

10.  The Sorghum bicolor genome and the diversification of grasses.

Authors:  Andrew H Paterson; John E Bowers; Rémy Bruggmann; Inna Dubchak; Jane Grimwood; Heidrun Gundlach; Georg Haberer; Uffe Hellsten; Therese Mitros; Alexander Poliakov; Jeremy Schmutz; Manuel Spannagl; Haibao Tang; Xiyin Wang; Thomas Wicker; Arvind K Bharti; Jarrod Chapman; F Alex Feltus; Udo Gowik; Igor V Grigoriev; Eric Lyons; Christopher A Maher; Mihaela Martis; Apurva Narechania; Robert P Otillar; Bryan W Penning; Asaf A Salamov; Yu Wang; Lifang Zhang; Nicholas C Carpita; Michael Freeling; Alan R Gingle; C Thomas Hash; Beat Keller; Patricia Klein; Stephen Kresovich; Maureen C McCann; Ray Ming; Daniel G Peterson; Doreen Ware; Peter Westhoff; Klaus F X Mayer; Joachim Messing; Daniel S Rokhsar
Journal:  Nature       Date:  2009-01-29       Impact factor: 49.962
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.