Literature DB >> 15485265

Simulations of stable pores in membranes: system size dependence and line tension.

T V Tolpekina1, W K den Otter, W J Briels.   

Abstract

Amphiphilic bilayers with a pore were simulated using a coarse grained model. By stretching the bilayer to 70% beyond its equilibrium surface area, we established the phase diagram of pores, identifying regions where pores are stable, metastable, or unstable. A simple theoretical model is proposed to explain the phase diagram, and to calculate the critical and equilibrium relative stretches. Interestingly, these are found to scale with the inverse cubic root of the number of amphiphiles in the bilayer, thus explaining the order of magnitude difference between the simulated and the measured values. Three different methods are used to calculate a line tension coefficient of (3.5-4.0) x 10(-11) J/m, in good agreement with experimental data. (c) 2004 American Institute of Physics.

Mesh:

Substances:

Year:  2004        PMID: 15485265     DOI: 10.1063/1.1796254

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  24 in total

1.  Field theoretic study of bilayer membrane fusion: II. Mechanism of a stalk-hole complex.

Authors:  K Katsov; M Müller; M Schick
Journal:  Biophys J       Date:  2005-11-04       Impact factor: 4.033

2.  Surface viscosity, diffusion, and intermonolayer friction: simulating sheared amphiphilic bilayers.

Authors:  S A Shkulipa; W K den Otter; W J Briels
Journal:  Biophys J       Date:  2005-05-13       Impact factor: 4.033

3.  Pore formation in a lipid bilayer under a tension ramp: modeling the distribution of rupture tensions.

Authors:  Pierre-Alexandre Boucher; Béla Joós; Martin J Zuckermann; Luc Fournier
Journal:  Biophys J       Date:  2007-03-30       Impact factor: 4.033

4.  Field theoretic study of bilayer membrane fusion III: membranes with leaves of different composition.

Authors:  J Y Lee; M Schick
Journal:  Biophys J       Date:  2007-03-09       Impact factor: 4.033

5.  Computational and analytical modeling of cationic lipid-DNA complexes.

Authors:  Oded Farago; Niels Grønbech-Jensen
Journal:  Biophys J       Date:  2007-01-26       Impact factor: 4.033

6.  A Cellular Model of Shear-Induced Hemolysis.

Authors:  Salman Sohrabi; Yaling Liu
Journal:  Artif Organs       Date:  2017-01-03       Impact factor: 3.094

7.  Free energy landscape of rim-pore expansion in membrane fusion.

Authors:  Herre Jelger Risselada; Yuliya Smirnova; Helmut Grubmüller
Journal:  Biophys J       Date:  2014-11-18       Impact factor: 4.033

8.  Coarse-Grained Modeling of Pore Dynamics on the Red Blood Cell Membrane under Large Deformations.

Authors:  Meghdad Razizadeh; Mehdi Nikfar; Ratul Paul; Yaling Liu
Journal:  Biophys J       Date:  2020-06-24       Impact factor: 4.033

9.  Prediction of mechanical hemolysis in medical devices via a Lagrangian strain-based multiscale model.

Authors:  Mehdi Nikfar; Meghdad Razizadeh; Jiafeng Zhang; Ratul Paul; Zhongjun J Wu; Yaling Liu
Journal:  Artif Organs       Date:  2020-03-05       Impact factor: 3.094

Review 10.  A lipocentric view of peptide-induced pores.

Authors:  Gustavo Fuertes; Diana Giménez; Santi Esteban-Martín; Orlando L Sánchez-Muñoz; Jesús Salgado
Journal:  Eur Biophys J       Date:  2011-03-26       Impact factor: 1.733

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.