Literature DB >> 15483233

Molecular identification and characterization of two proposed new enterovirus serotypes, EV74 and EV75.

M Steven Oberste1, Suzanne M Michele1, Kaija Maher1, David Schnurr2, Daniel Cisterna3, Nina Junttila4, Moyez Uddin5, Jean-Jacques Chomel6, Chi-Shan Lau7, Walid Ridha8, Suleiman Al-Busaidy9, Helene Norder4, Lars O Magnius4, Mark A Pallansch1.   

Abstract

Sequencing of the gene that encodes the capsid protein VP1 has been used as a surrogate for antigenic typing in order to distinguish enterovirus serotypes; three new serotypes were identified recently by this method. In this study, 14 enterovirus isolates from six countries were characterized as members of two new types within the species Human enterovirus B, based on sequencing of the complete capsid-encoding (P1) region. Isolates within each of these two types differed significantly from one another and from all other known enterovirus serotypes on the basis of sequences that encode either VP1 alone or the entire P1 region. Members of each type were > or =77.2 % identical to one another (89.5 % amino acid identity) in VP1, but members of the two different types differed from one another and from other enteroviruses by > or =31 % in nucleotide sequence (25 % amino acid sequence difference), indicating that the two groups represent separate new candidate enterovirus types. The complete P1 sequences differed from those of all other enterovirus serotypes by > or =31 % (26 % amino acid sequence difference), but were highly conserved within a serotype (<8 % amino acid sequence difference). Phylogenetic analyses demonstrated that isolates of the same serotype were monophyletic in both VP1 and the capsid as a whole, as shown previously for other enterovirus serotypes. This paper proposes that these 14 isolates should be classified as members of two new human enterovirus types, enteroviruses 74 and 75 (EV74 and EV75).

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Year:  2004        PMID: 15483233     DOI: 10.1099/vir.0.80148-0

Source DB:  PubMed          Journal:  J Gen Virol        ISSN: 0022-1317            Impact factor:   3.891


  37 in total

1.  Molecular identification and analysis of nonserotypeable human enteroviruses.

Authors:  Fei Zhou; Fanrong Kong; Kenneth McPhie; Mala Ratnamohan; Gwendolyn L Gilbert; Dominic E Dwyer
Journal:  J Clin Microbiol       Date:  2010-02-17       Impact factor: 5.948

2.  High prevalence of human enterovirus a infections in natural circulation of human enteroviruses.

Authors:  Elisabet Witsø; Gustavo Palacios; Ondrej Cinek; Lars C Stene; Bjørn Grinde; Diana Janowitz; W Ian Lipkin; Kjersti S Rønningen
Journal:  J Clin Microbiol       Date:  2006-08-30       Impact factor: 5.948

3.  Sensitive, seminested PCR amplification of VP1 sequences for direct identification of all enterovirus serotypes from original clinical specimens.

Authors:  W Allan Nix; M Steven Oberste; Mark A Pallansch
Journal:  J Clin Microbiol       Date:  2006-08       Impact factor: 5.948

4.  Analysis of a new human parechovirus allows the definition of parechovirus types and the identification of RNA structural domains.

Authors:  Mohammed Al-Sunaidi; Cigdem H Williams; Pamela J Hughes; David P Schnurr; Glyn Stanway
Journal:  J Virol       Date:  2006-09-27       Impact factor: 5.103

5.  Partial 3D gene sequences of Coxsackie viruses reveal interspecies exchanges.

Authors:  Eugenia Bolanaki; Christine Kottaridi; Panayotis Markoulatos; Zaharoula Kyriakopoulou; Lukas Margaritis; Theodoros Katsorchis
Journal:  Virus Genes       Date:  2007-02-23       Impact factor: 2.332

6.  Human parechovirus type 1, 3, 4, 5, and 6 detection in picornavirus cultures.

Authors:  Michel de Vries; Krzysztof Pyrc; Ron Berkhout; Wilma Vermeulen-Oost; Ronald Dijkman; Maarten F Jebbink; Sylvia Bruisten; Ben Berkhout; Lia van der Hoek
Journal:  J Clin Microbiol       Date:  2007-12-12       Impact factor: 5.948

7.  Human parechovirus infection in children hospitalized with acute gastroenteritis in Sri Lanka.

Authors:  Ngan Thi Kim Pham; Sayaka Takanashi; Dinh Nguyen Tran; Quang Duy Trinh; Chandra Abeysekera; Asiri Abeygunawardene; Pattara Khamrin; Shoko Okitsu; Hiroyuki Shimizu; Masashi Mizuguchi; Hiroshi Ushijima
Journal:  J Clin Microbiol       Date:  2010-11-03       Impact factor: 5.948

8.  Human enterovirus 109: a novel interspecies recombinant enterovirus isolated from a case of acute pediatric respiratory illness in Nicaragua.

Authors:  Nathan L Yozwiak; Peter Skewes-Cox; Aubree Gordon; Saira Saborio; Guillermina Kuan; Angel Balmaseda; Don Ganem; Eva Harris; Joseph L DeRisi
Journal:  J Virol       Date:  2010-06-30       Impact factor: 5.103

9.  High frequency and diversity of species C enteroviruses in Cameroon and neighboring countries.

Authors:  Serge Alain Sadeuh-Mba; Maël Bessaud; Denis Massenet; Marie-Line Joffret; Marie-Claire Endegue; Richard Njouom; Jean-Marc Reynes; Dominique Rousset; Francis Delpeyroux
Journal:  J Clin Microbiol       Date:  2012-12-19       Impact factor: 5.948

10.  Novel human parechovirus, Sri Lanka.

Authors:  Ngan Thi Kim Pham; Quang Duy Trinh; Sayaka Takanashi; Chandra Abeysekera; Asiri Abeygunawardene; Hideaki Shimizu; Pattara Khamrin; Shoko Okitsu; Masashi Mizuguchi; Hiroshi Ushijima
Journal:  Emerg Infect Dis       Date:  2010-01       Impact factor: 6.883

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