Literature DB >> 15482259

Calcium-induced tertiary structure modifications of endo-beta-1,3-glucanase from Pyrococcus furiosus in 7.9 M guanidinium chloride.

Roberta Chiaraluce1, Giulio Gianese, Sebastiana Angelaccio, Rita Florio, Johan F T van Lieshout, John van der Oost, Valerio Consalvi.   

Abstract

The family 16 endo-beta-1,3 glucanase from the extremophilic archaeon Pyrococcus furiosus is a laminarinase, which in 7.9 M GdmCl (guanidinium chloride) maintains a significant amount of tertiary structure without any change of secondary structure. The addition of calcium to the enzyme in 7.9 M GdmCl causes significant changes to the near-UV CD and fluorescence spectra, suggesting a notable increase in the tertiary structure which leads to a state comparable, but not identical, to the native state. The capability to interact with calcium in 7.9 M GdmCl with a consistent recovery of native tertiary structure is a unique property of this extremely stable endo-beta-1,3 glucanase. The effect of calcium on the thermodynamic parameters relative to the GdmCl-induced equilibrium unfolding has been analysed by CD and fluorescence spectroscopy. The interaction of calcium with the native form of the enzyme is studied by Fourier-transform infrared spectroscopy in the absorption region of carboxylate groups and by titration in the presence of a chromophoric chelator. A homology-based model of the enzyme is generated and used to predict the putative binding site(s) for calcium and the structural interactions potentially responsible for the unusual stability of this protein, in comparison with other family 16 glycoside hydrolases.

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Year:  2005        PMID: 15482259      PMCID: PMC1134870          DOI: 10.1042/BJ20041137

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  48 in total

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Authors:  M M Santoro; D W Bolen
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5.  Infrared spectroscopy--conformation.

Authors:  H Susi
Journal:  Methods Enzymol       Date:  1972       Impact factor: 1.600

6.  Solute perturbation of protein fluorescence. The quenching of the tryptophyl fluorescence of model compounds and of lysozyme by iodide ion.

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7.  Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features.

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Journal:  Biopolymers       Date:  1983-12       Impact factor: 2.505

8.  Ion-pairs in proteins.

Authors:  D J Barlow; J M Thornton
Journal:  J Mol Biol       Date:  1983-08-25       Impact factor: 5.469

9.  Solvent-accessible surfaces of proteins and nucleic acids.

Authors:  M L Connolly
Journal:  Science       Date:  1983-08-19       Impact factor: 47.728

10.  New calcium indicators and buffers with high selectivity against magnesium and protons: design, synthesis, and properties of prototype structures.

Authors:  R Y Tsien
Journal:  Biochemistry       Date:  1980-05-27       Impact factor: 3.162

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