Literature DB >> 15480865

Identification and autonomous replication capability of a chromosomal replication origin from the archaeon Sulfolobus solfataricus.

Patrizia Contursi1, Francesca M Pisani, Andrei Grigoriev, Raffaele Cannio, Simonetta Bartolucci, Mosè Rossi.   

Abstract

Here, we describe the identification of a chromosomal DNA replication origin (oriC) from the hyperthermophilic archaeon Sulfolobus solfataricus (subdomain of Crenarchaeota). By means of a cumulative GC-skew analysis of the Sulfolobus genome sequence, a candidate oriC was mapped within a 1.12-kb region located between the two divergently transcribed MCM- and cdc6-like genes. We demonstrated that plasmids containing the Sulfolobus oriC sequence and a hygromycin-resistance selectable marker were maintained in an episomal state in transformed S. solfataricus cells under selective pressure. The proposed location of the origin was confirmed by 2-D gel electrophoresis experiments. This is the first report on the functional cloning of a chromosomal oriC from an archaeon and represents an important step toward the reconstitution of an archaeal in vitro DNA replication system.

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Year:  2004        PMID: 15480865     DOI: 10.1007/s00792-004-0399-y

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  26 in total

Review 1.  Replication origins in metazoan chromosomes: fact or fiction?

Authors:  M L DePamphilis
Journal:  Bioessays       Date:  1999-01       Impact factor: 4.345

2.  Graphical genome comparison: rearrangements and replication origin of Helicobacter pylori.

Authors:  A Grigoriev
Journal:  Trends Genet       Date:  2000-09       Impact factor: 11.639

Review 3.  DNA replication in the hyperthermophilic archaeon Sulfolobus solfataricus.

Authors:  I Dionne; N P Robinson; A T McGeoch; V L Marsh; A Reddish; S D Bell
Journal:  Biochem Soc Trans       Date:  2003-06       Impact factor: 5.407

4.  Amino acid residues involved in determining the processivity of the 3'-5' exonuclease activity in a family B DNA polymerase from the thermoacidophilic archaeon Sulfolobus solfataricus.

Authors:  F M Pisani; M De Felice; M Rossi
Journal:  Biochemistry       Date:  1998-10-20       Impact factor: 3.162

5.  Analyzing genomes with cumulative skew diagrams.

Authors:  A Grigoriev
Journal:  Nucleic Acids Res       Date:  1998-05-15       Impact factor: 16.971

Review 6.  Archaeal genomics: an overview.

Authors:  G J Olsen; C R Woese
Journal:  Cell       Date:  1997-06-27       Impact factor: 41.582

7.  Analysis of replication intermediates by two-dimensional agarose gel electrophoresis.

Authors:  K L Friedman; B J Brewer
Journal:  Methods Enzymol       Date:  1995       Impact factor: 1.600

8.  Biochemical characterization of a clamp-loader complex homologous to eukaryotic replication factor C from the hyperthermophilic archaeon Sulfolobus solfataricus.

Authors:  F M Pisani; M De Felice; F Carpentieri; M Rossi
Journal:  J Mol Biol       Date:  2000-08-04       Impact factor: 5.469

9.  Phenotypic characterization of the archaebacterial genus Sulfolobus: comparison of five wild-type strains.

Authors:  D W Grogan
Journal:  J Bacteriol       Date:  1989-12       Impact factor: 3.490

10.  An autonomously replicating transforming vector for Sulfolobus solfataricus.

Authors:  R Cannio; P Contursi; M Rossi; S Bartolucci
Journal:  J Bacteriol       Date:  1998-06       Impact factor: 3.490

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  13 in total

Review 1.  Plasmids and viruses of the thermoacidophilic crenarchaeote Sulfolobus.

Authors:  Georg Lipps
Journal:  Extremophiles       Date:  2006-01-06       Impact factor: 2.395

2.  Disruption of a sugar transporter gene cluster in a hyperthermophilic archaeon using a host-marker system based on antibiotic resistance.

Authors:  Rie Matsumi; Kenji Manabe; Toshiaki Fukui; Haruyuki Atomi; Tadayuki Imanaka
Journal:  J Bacteriol       Date:  2007-01-26       Impact factor: 3.490

3.  Defining components of the chromosomal origin of replication of the hyperthermophilic archaeon Pyrococcus furiosus needed for construction of a stable replicating shuttle vector.

Authors:  Joel Farkas; Daehwan Chung; Megan DeBarry; Michael W W Adams; Janet Westpheling
Journal:  Appl Environ Microbiol       Date:  2011-07-22       Impact factor: 4.792

Review 4.  Molecular biology of fuselloviruses and their satellites.

Authors:  Patrizia Contursi; Salvatore Fusco; Raffaele Cannio; Qunxin She
Journal:  Extremophiles       Date:  2014-02-23       Impact factor: 2.395

Review 5.  Galactomannan degradation by thermophilic enzymes: a hot topic for biotechnological applications.

Authors:  Martina Aulitto; Salvatore Fusco; Danila Limauro; Gabriella Fiorentino; Simonetta Bartolucci; Patrizia Contursi
Journal:  World J Microbiol Biotechnol       Date:  2019-01-30       Impact factor: 3.312

6.  DNA replication and strand asymmetry in prokaryotic and mitochondrial genomes.

Authors:  Xuhua Xia
Journal:  Curr Genomics       Date:  2012-03       Impact factor: 2.236

7.  Hot transcriptomics.

Authors:  Jasper Walther; Pawel Sierocinski; John van der Oost
Journal:  Archaea       Date:  2011-02-07       Impact factor: 3.273

8.  A large scale comparative genomic analysis reveals insertion sites for newly acquired genomic islands in bacterial genomes.

Authors:  Pengcheng Du; Yinxue Yang; Haiying Wang; Di Liu; George F Gao; Chen Chen
Journal:  BMC Microbiol       Date:  2011-06-15       Impact factor: 3.605

9.  Small multicopy, non-integrative shuttle vectors based on the plasmid pRN1 for Sulfolobus acidocaldarius and Sulfolobus solfataricus, model organisms of the (cren-)archaea.

Authors:  Silvia Berkner; Dennis Grogan; Sonja-Verena Albers; Georg Lipps
Journal:  Nucleic Acids Res       Date:  2007-06-18       Impact factor: 16.971

10.  Genomewide and biochemical analyses of DNA-binding activity of Cdc6/Orc1 and Mcm proteins in Pyrococcus sp.

Authors:  Fujihiko Matsunaga; Annie Glatigny; Marie-Hélène Mucchielli-Giorgi; Nicolas Agier; Hervé Delacroix; Laetitia Marisa; Patrice Durosay; Yoshizumi Ishino; Lawrence Aggerbeck; Patrick Forterre
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971

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