Literature DB >> 15480859

Genetic diversity of sapovirus in fecal specimens from infants and children with acute gastroenteritis in Pakistan.

T G Phan1, M Okame, T A Nguyen, O Nishio, S Okitsu, H Ushijima.   

Abstract

A total of 517 fecal specimens collected from infants and children with acute gastroenteritis in Karachi city, Pakistan during 1990-1994 were examined for the presence of sapovirus by RT-PCR and sequence analysis methods. Sapovirus was identified in 17 of 517 (3.2%) specimens. Sapovirus was further clustered into three distinct genogroups (I, II and IV) and these presented 70.6%, 23.5% and 5.9%, respectively. Our results clearly indicated that sapovirus could be classified into 7 GI and 4 GII genotypes. It was noteworthy to point out that sapovirus detected among Pakistani infants and children with acute gastroenteritis demonstrated the great genetic diversity and presented novel sapovirus genotypes.

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Year:  2004        PMID: 15480859     DOI: 10.1007/s00705-004-0401-0

Source DB:  PubMed          Journal:  Arch Virol        ISSN: 0304-8608            Impact factor:   2.574


  7 in total

1.  Emergence of rare sapovirus genotype among infants and children with acute gastroenteritis in Japan.

Authors:  T G Phan; Q D Trinh; F Yagyu; S Okitsu; H Ushijima
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2007-01       Impact factor: 3.267

Review 2.  Comprehensive review of human sapoviruses.

Authors:  Tomoichiro Oka; Qiuhong Wang; Kazuhiko Katayama; Linda J Saif
Journal:  Clin Microbiol Rev       Date:  2015-01       Impact factor: 26.132

3.  Etiological study of enteric viruses and the genetic diversity of norovirus, sapovirus, adenovirus, and astrovirus in children with diarrhea in Chongqing, China.

Authors:  Zengzhi Ren; Yuanmei Kong; Jun Wang; Qianqian Wang; Ailong Huang; Hongmei Xu
Journal:  BMC Infect Dis       Date:  2013-09-03       Impact factor: 3.090

4.  Human Sapovirus among Outpatients with Acute Gastroenteritis in Spain: A One-Year Study.

Authors:  Miguel F Varela; Enrique Rivadulla; Alberto Lema; Jesús L Romalde
Journal:  Viruses       Date:  2019-02-08       Impact factor: 5.048

5.  Unveiling Viruses Associated with Gastroenteritis Using a Metagenomics Approach.

Authors:  Xavier Fernandez-Cassi; Sandra Martínez-Puchol; Marcelle Silva-Sales; Thais Cornejo; Rosa Bartolome; Silvia Bofill-Mas; Rosina Girones
Journal:  Viruses       Date:  2020-12-13       Impact factor: 5.048

6.  Detection and characterization of human astrovirus and sapovirus in outpatients with acute gastroenteritis in Guangzhou, China.

Authors:  Xin Luo; Jian-Kai Deng; Xiao-Ping Mu; Nan Yu; Xiaoyan Che
Journal:  BMC Gastroenterol       Date:  2021-12-03       Impact factor: 3.067

Review 7.  Prevalence of Human Sapovirus in Low and Middle Income Countries.

Authors:  Mpho Magwalivha; Jean-Pierre Kabue; Afsatou Ndama Traore; Natasha Potgieter
Journal:  Adv Virol       Date:  2018-09-02
  7 in total

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