Literature DB >> 15479158

Steady-state kinetics and inhibition of anaerobically purified human homogentisate 1,2-dioxygenase.

Edwin J A Veldhuizen1, Frédéric H Vaillancourt, Cheryl J Whiting, Marvin M-Y Hsiao, Geneviève Gingras, Yufang Xiao, Robert M Tanguay, John Boukouvalas, Lindsay D Eltis.   

Abstract

HGO (homogentisate 1,2-dioxygenase; EC 1.13.11.5) catalyses the O2-dependent cleavage of HGA (homogentisate) to maleylacetoacetate in the catabolism of tyrosine. Anaerobic purification of heterologously expressed Fe(II)-containing human HGO yielded an enzyme preparation with a specific activity of 28.3+/- 0.6 micromol x min(-1) x mg(-1) (20 mM Mes, 80 mM NaCl, pH 6.2, 25 degrees C), which is almost twice that of the most active preparation described to date. Moreover, the addition of reducing agents or other additives did not increase the specific activity, in contrast with previous reports. The apparent specificity of HGO for HGA was highest at pH 6.2 and the steady-state cleavage of HGA fit a compulsory-order ternary-complex mechanism (K(m) value of 28.6+/-6.2 microM for HGA, K(m) value of 1240+/-160 microM for O2). Free HGO was subject to inactivation in the presence of O2 and during the steady-state cleavage of HGA. Both cases involved the oxidation of the active site Fe(II). 3-Cl HGA, a potential inhibitor of HGO, and its isosteric analogue, 3-Me HGO, were synthesized. At saturating substrate concentrations, HGO cleaved 3-Me and 3-Cl HGA 10 and 100 times slower than HGA respectively. The apparent specificity of HGO for HGA was approx. two orders of magnitude higher than for either 3-Me or 3-Cl HGA. Interestingly, 3-Cl HGA inactivated HGO only twice as rapidly as HGA. This contrasts with what has been observed in mechanistically related dioxygenases, which are rapidly inactivated by chlorinated substrate analogues, such as 3-hydroxyanthranilate dioxygenase by 4-Cl 3-hydroxyanthranilate.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15479158      PMCID: PMC1134795          DOI: 10.1042/BJ20041370

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  47 in total

1.  Crystal structure of human homogentisate dioxygenase.

Authors:  G P Titus; H A Mueller; J Burgner; S Rodríguez De Córdoba; M A Peñalva; D E Timm
Journal:  Nat Struct Biol       Date:  2000-07

2.  Evolution of functional diversity in the cupin superfamily.

Authors:  J M Dunwell; A Culham; C E Carter; C R Sosa-Aguirre; P W Goodenough
Journal:  Trends Biochem Sci       Date:  2001-12       Impact factor: 13.807

3.  Inhibition and activation of the oxidation of homogentisic acid.

Authors:  B SCHEPARTZ
Journal:  J Biol Chem       Date:  1953-11       Impact factor: 5.157

4.  3-Hydroxyanthranilic acid accumulation following administration of the 3-hydroxyanthranilic acid 3,4-dioxygenase inhibitor NCR-631.

Authors:  B Fornstedt-Wallin; J Lundström; G Fredriksson; R Schwarcz; J Luthman
Journal:  Eur J Pharmacol       Date:  1999-12-10       Impact factor: 4.432

5.  Direct ring fission of salicylate by a salicylate 1,2-dioxygenase activity from Pseudaminobacter salicylatoxidans.

Authors:  J P Hintner; C Lechner; U Riegert; A E Kuhm; T Storm; T Reemtsma; A Stolz
Journal:  J Bacteriol       Date:  2001-12       Impact factor: 3.490

6.  Structural and functional analysis of mutations in alkaptonuria.

Authors:  J M Rodríguez; D E Timm; G P Titus; D Beltrán-Valero De Bernabé; O Criado; H A Mueller; S Rodríguez De Córdoba; M A Peñalva
Journal:  Hum Mol Genet       Date:  2000-09-22       Impact factor: 6.150

7.  Phase transfer of monosaccharides through noncovalent interactions: selective extraction of glucose by a lipophilic cage receptor.

Authors:  Theo J Ryan; Grégory Lecollinet; Trinidad Velasco; Anthony P Davis
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-02       Impact factor: 11.205

8.  The mechanism-based inactivation of 2,3-dihydroxybiphenyl 1,2-dioxygenase by catecholic substrates.

Authors:  Frederic H Vaillancourt; Genevieve Labbe; Nathalie M Drouin; Pascal D Fortin; Lindsay D Eltis
Journal:  J Biol Chem       Date:  2001-11-13       Impact factor: 5.157

9.  Definitive evidence for monoanionic binding of 2,3-dihydroxybiphenyl to 2,3-dihydroxybiphenyl 1,2-dioxygenase from UV resonance Raman spectroscopy, UV/Vis absorption spectroscopy, and crystallography.

Authors:  Frédéric H Vaillancourt; Christopher J Barbosa; Thomas G Spiro; Jeffrey T Bolin; Michael W Blades; Robin F B Turner; Lindsay D Eltis
Journal:  J Am Chem Soc       Date:  2002-03-20       Impact factor: 15.419

10.  Natural history of alkaptonuria.

Authors:  Chanika Phornphutkul; Wendy J Introne; Monique B Perry; Isa Bernardini; Mark D Murphey; Diana L Fitzpatrick; Paul D Anderson; Marjan Huizing; Yair Anikster; Lynn H Gerber; William A Gahl
Journal:  N Engl J Med       Date:  2002-12-26       Impact factor: 91.245

View more
  10 in total

1.  Determination of the active site of Sphingobium chlorophenolicum 2,6-dichlorohydroquinone dioxygenase (PcpA).

Authors:  Timothy E Machonkin; Patrick L Holland; Kristine N Smith; Justin S Liberman; Adriana Dinescu; Thomas R Cundari; Sara S Rocks
Journal:  J Biol Inorg Chem       Date:  2010-03       Impact factor: 3.358

2.  Structural, spectroscopic, and electrochemical properties of nonheme Fe(II)-hydroquinonate complexes: synthetic models of hydroquinone dioxygenases.

Authors:  Amanda E Baum; Heaweon Park; Denan Wang; Sergey V Lindeman; Adam T Fiedler
Journal:  Dalton Trans       Date:  2012-10-21       Impact factor: 4.390

3.  A Biomimetic System for Studying Salicylate Dioxygenase.

Authors:  Atanu Banerjee; Jia Li; Monika A Molenda; William W Brennessel; Ferman A Chavez
Journal:  ACS Symp Ser Am Chem Soc       Date:  2019-07-12

4.  Synthetic, spectroscopic, and DFT studies of iron complexes with iminobenzo(semi)quinone ligands: implications for o-aminophenol dioxygenases.

Authors:  Michael M Bittner; David Kraus; Sergey V Lindeman; Codrina V Popescu; Adam T Fiedler
Journal:  Chemistry       Date:  2013-06-06       Impact factor: 5.236

5.  Visualizing the substrate-, superoxo-, alkylperoxo-, and product-bound states at the nonheme Fe(II) site of homogentisate dioxygenase.

Authors:  Jae-Hun Jeoung; Martin Bommer; Tzong-Yuan Lin; Holger Dobbek
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-15       Impact factor: 11.205

6.  Molecular cloning of the HGD gene and association of SNPs with meat quality traits in Chinese red cattle.

Authors:  Guoli Zhou; Crissy Dudgeon; Mei Li; Yang Cao; Lichun Zhang; Haiguo Jin
Journal:  Mol Biol Rep       Date:  2010-01       Impact factor: 2.316

7.  Anaerobic Protein Purification and Kinetic Analysis via Oxygen Electrode for Studying DesB Dioxygenase Activity and Inhibition.

Authors:  Stacy N Uchendu; Angelika Rafalowski; Erin F Cohn; Luke W Davoren; Erika A Taylor
Journal:  J Vis Exp       Date:  2018-10-03       Impact factor: 1.355

8.  Characterizing the promiscuity of LigAB, a lignin catabolite degrading extradiol dioxygenase from Sphingomonas paucimobilis SYK-6.

Authors:  Kevin P Barry; Erika A Taylor
Journal:  Biochemistry       Date:  2013-09-11       Impact factor: 3.162

9.  Benchtop Immobilized Metal Affinity Chromatography, Reconstitution and Assay of a Polyhistidine Tagged Metalloenzyme for the Undergraduate Laboratory.

Authors:  Keri L Colabroy; Katlyn Mayer
Journal:  J Vis Exp       Date:  2018-08-23       Impact factor: 1.355

Review 10.  New insights and advances on pyomelanin production: from microbial synthesis to applications.

Authors:  Faustine Lorquin; Philippe Piccerelle; Caroline Orneto; Maxime Robin; Jean Lorquin
Journal:  J Ind Microbiol Biotechnol       Date:  2022-07-30       Impact factor: 4.258

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.