Literature DB >> 1547774

RNA editing in tobacco chloroplasts leads to the formation of a translatable psbL mRNA by a C to U substitution within the initiation codon.

J Kudla1, G L Igloi, M Metzlaff, R Hagemann, H Kössel.   

Abstract

The psbL gene which codes for a 38 amino acid peptide of photosystem II, together with the photosynthetic genes psbE and psbF, is contained in a conserved position of many species of higher plant plastomes. The alignment of the psbL nucleotide sequences from ten species shows strong conservation, which is indicative of a functional gene. The tobacco and spinach psbL genes have, however, an ACG codon instead of the initiator ATG codon observed in the homologous position of the other eight species. Evidence is presented that in tobacco chloroplasts a translatable psbL mRNA containing an AUG initiator codon is formed by a C to U editing of the ACG codon. This observation, following the previously reported editing of an rpl2 gene in maize chloroplasts, underlines a more widespread occurrence of this type of posttranscriptional mRNA modification and demonstrates its presence in a dicotyledon plant.

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Year:  1992        PMID: 1547774      PMCID: PMC556551          DOI: 10.1002/j.1460-2075.1992.tb05149.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  26 in total

1.  Codon usage in plant genes.

Authors:  E E Murray; J Lotzer; M Eberle
Journal:  Nucleic Acids Res       Date:  1989-01-25       Impact factor: 16.971

2.  Fine structural features of the chloroplast genome: comparison of the sequenced chloroplast genomes.

Authors:  H Shimada; M Sugiura
Journal:  Nucleic Acids Res       Date:  1991-03-11       Impact factor: 16.971

3.  RNA editing in plant mitochondria.

Authors:  P S Covello; M W Gray
Journal:  Nature       Date:  1989-10-19       Impact factor: 49.962

4.  Optimization of asymmetric polymerase chain reaction for rapid fluorescent DNA sequencing.

Authors:  R K Wilson; C Chen; L Hood
Journal:  Biotechniques       Date:  1990-02       Impact factor: 1.993

5.  RNA editing in plant mitochondria.

Authors:  R Hiesel; B Wissinger; W Schuster; A Brennicke
Journal:  Science       Date:  1989-12-22       Impact factor: 47.728

6.  Two small open reading frames are co-transcribed with the pea chloroplast genes for the polypeptides of cytochrome b-559.

Authors:  D L Willey; J C Gray
Journal:  Curr Genet       Date:  1989-03       Impact factor: 3.886

7.  Identification of functional open reading frames in chloroplast genomes.

Authors:  K H Wolfe; P M Sharp
Journal:  Gene       Date:  1988-06-30       Impact factor: 3.688

8.  A non-radioactive automated method for DNA sequence determination.

Authors:  W Ansorge; B S Sproat; J Stegemann; C Schwager
Journal:  J Biochem Biophys Methods       Date:  1986-12

9.  A novel form of tissue-specific RNA processing produces apolipoprotein-B48 in intestine.

Authors:  L M Powell; S C Wallis; R J Pease; Y H Edwards; T J Knott; J Scott
Journal:  Cell       Date:  1987-09-11       Impact factor: 41.582

10.  The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals.

Authors:  J Hiratsuka; H Shimada; R Whittier; T Ishibashi; M Sakamoto; M Mori; C Kondo; Y Honji; C R Sun; B Y Meng
Journal:  Mol Gen Genet       Date:  1989-06
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  54 in total

1.  Involvement of a site-specific trans-acting factor and a common RNA-binding protein in the editing of chloroplast mRNAs: development of a chloroplast in vitro RNA editing system.

Authors:  T Hirose; M Sugiura
Journal:  EMBO J       Date:  2001-03-01       Impact factor: 11.598

2.  Transfer of plastid RNA-editing activity to novel sites suggests a critical role for spacing in editing-site recognition.

Authors:  M Hermann; R Bock
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-27       Impact factor: 11.205

3.  Surprising features of plastid ndhD transcripts: addition of non-encoded nucleotides and polysome association of mRNAs with an unedited start codon.

Authors:  Aitor Zandueta-Criado; Ralph Bock
Journal:  Nucleic Acids Res       Date:  2004-01-26       Impact factor: 16.971

4.  Identification of editing positions in the ndhB transcript from maize chloroplasts reveals sequence similarities between editing sites of chloroplasts and plant mitochondria.

Authors:  R M Maier; K Neckermann; B Hoch; N B Akhmedov; H Kössel
Journal:  Nucleic Acids Res       Date:  1992-12-11       Impact factor: 16.971

5.  Recognition of RNA editing sites is directed by unique proteins in chloroplasts: biochemical identification of cis-acting elements and trans-acting factors involved in RNA editing in tobacco and pea chloroplasts.

Authors:  Tetsuya Miyamoto; Junichi Obokata; Masahiro Sugiura
Journal:  Mol Cell Biol       Date:  2002-10       Impact factor: 4.272

6.  A single nuclear gene specifies the abundance and extent of RNA editing of a plant mitochondrial transcript.

Authors:  B Lu; M R Hanson
Journal:  Nucleic Acids Res       Date:  1992-11-11       Impact factor: 16.971

7.  The psbL gene from bell pepper (Capsicum annuum): plastid RNA editing also occurs in non-photosynthetic chromoplasts.

Authors:  M Kuntz; B Camara; J H Weil; R Schantz
Journal:  Plant Mol Biol       Date:  1992-12       Impact factor: 4.076

8.  Rapid evolution of RNA editing sites in a small non-essential plastid gene.

Authors:  Andreas Fiebig; Sandra Stegemann; Ralph Bock
Journal:  Nucleic Acids Res       Date:  2004-07-07       Impact factor: 16.971

9.  Two nucleotides next to the anticodon of cytoplasmic rat tRNA(Asp) are likely generated by RNA editing.

Authors:  H Beier; M C Lee; T Sekiya; Y Kuchino; S Nishimura
Journal:  Nucleic Acids Res       Date:  1992-06-11       Impact factor: 16.971

10.  Evidence for RNA editing in mitochondria of all major groups of land plants except the Bryophyta.

Authors:  R Hiesel; B Combettes; A Brennicke
Journal:  Proc Natl Acad Sci U S A       Date:  1994-01-18       Impact factor: 11.205

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