Literature DB >> 15476880

Enhancement of dengue virus translation: role of the 3' untranslated region and the terminal 3' stem-loop domain.

Katherine L Holden1, Eva Harris.   

Abstract

An essential step for a productive infection by the dengue flavivirus (DEN) is translation of the m(7)G-capped, nonpolyadenylated positive-sense RNA genome. We have recently identified sequences within the DEN 3' untranslated region (UTR) that modulate viral translation. Here, we show that the DEN type 2 (DEN2) 3'UTR stimulated translation of m(7)G-capped DEN2 5'UTR-containing reporter mRNAs in baby hamster kidney (BHK) cells compared to a 3' vector sequence. Analogous to the 3' poly(A) tail, the DEN2 3'UTR also enhanced translation of reporter mRNAs containing (i) a nonfunctional A cap, (ii) the 5'UTR of human beta-globin, or (iii) a viral internal ribosome entry site (IRES). In all cases, approximately half of the translation efficiency was due to the terminal 3' stem-loop (3'SL) domain. In addition, the 3'SL domain increased the association of mRNAs with polysomes. Together, these results indicate that the DEN2 3'UTR, mediated in part by the 3'SL domain, enhances translation initiation, possibly after recognition of the 5' cap structure.

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Year:  2004        PMID: 15476880     DOI: 10.1016/j.virol.2004.08.004

Source DB:  PubMed          Journal:  Virology        ISSN: 0042-6822            Impact factor:   3.616


  46 in total

1.  Identification of cis-acting elements in the 3'-untranslated region of the dengue virus type 2 RNA that modulate translation and replication.

Authors:  Mark Manzano; Erin D Reichert; Stephanie Polo; Barry Falgout; Wojciech Kasprzak; Bruce A Shapiro; Radhakrishnan Padmanabhan
Journal:  J Biol Chem       Date:  2011-04-22       Impact factor: 5.157

2.  Composition of the sequence downstream of the dengue virus 5' cyclization sequence (dCS) affects viral RNA replication.

Authors:  Peter Friebe; José Peña; Marie O F Pohl; Eva Harris
Journal:  Virology       Date:  2011-12-01       Impact factor: 3.616

3.  Quantitative mass spectrometry of DENV-2 RNA-interacting proteins reveals that the DEAD-box RNA helicase DDX6 binds the DB1 and DB2 3' UTR structures.

Authors:  Alex Michael Ward; Katell Bidet; Ang Yinglin; Siok Ghee Ler; Kelly Hogue; Walter Blackstock; Jayantha Gunaratne; Mariano A Garcia-Blanco
Journal:  RNA Biol       Date:  2011-11-01       Impact factor: 4.652

4.  Functional analysis of the tick-borne encephalitis virus cyclization elements indicates major differences between mosquito-borne and tick-borne flaviviruses.

Authors:  Regina M Kofler; Verena M Hoenninger; Caroline Thurner; Christian W Mandl
Journal:  J Virol       Date:  2006-04       Impact factor: 5.103

5.  Aedes aegypti vectorial capacity is determined by the infecting genotype of dengue virus.

Authors:  Justin R Anderson; Rebeca Rico-Hesse
Journal:  Am J Trop Med Hyg       Date:  2006-11       Impact factor: 2.345

6.  Oscillating kissing stem-loop interactions mediate 5' scanning-dependent translation by a viral 3'-cap-independent translation element.

Authors:  Aurélie M Rakotondrafara; Charlotta Polacek; Eva Harris; W Allen Miller
Journal:  RNA       Date:  2006-08-18       Impact factor: 4.942

Review 7.  Recent advances in deciphering viral and host determinants of dengue virus replication and pathogenesis.

Authors:  Karen Clyde; Jennifer L Kyle; Eva Harris
Journal:  J Virol       Date:  2006-08-23       Impact factor: 5.103

8.  Structures required for poly(A) tail-independent translation overlap with, but are distinct from, cap-independent translation and RNA replication signals at the 3' end of Tobacco necrosis virus RNA.

Authors:  Ruizhong Shen; W Allen Miller
Journal:  Virology       Date:  2006-10-04       Impact factor: 3.616

9.  Specific requirements for elements of the 5' and 3' terminal regions in flavivirus RNA synthesis and viral replication.

Authors:  Li Yu; Masako Nomaguchi; R Padmanabhan; Lewis Markoff
Journal:  Virology       Date:  2008-01-29       Impact factor: 3.616

Review 10.  Plasma leakage in dengue haemorrhagic fever.

Authors:  Anon Srikiatkhachorn
Journal:  Thromb Haemost       Date:  2009-12       Impact factor: 5.249

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