Literature DB >> 15473715

Linear scaling computation of the Fock matrix. VII. Parallel computation of the Coulomb matrix.

Chee Kwan Gan1, C J Tymczak, Matt Challacombe.   

Abstract

We present parallelization of a quantum-chemical tree-code for linear scaling computation of the Coulomb matrix. Equal time partition is used to load balance computation of the Coulomb matrix. Equal time partition is a measurement based algorithm for domain decomposition that exploits small variation of the density between self-consistent-field cycles to achieve load balance. Efficiency of the equal time partition is illustrated by several tests involving both finite and periodic systems. It is found that equal time partition is able to deliver 91%-98% efficiency with 128 processors in the most time consuming part of the Coulomb matrix calculation. The current parallel quantum chemical tree code is able to deliver 63%-81% overall efficiency on 128 processors with fine grained parallelism (less than two heavy atoms per processor).

Year:  2004        PMID: 15473715     DOI: 10.1063/1.1790891

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  3 in total

1.  Elongation cutoff technique: low-order scaling SCF method.

Authors:  Jacek Korchowiec; Jakub Lewandowski
Journal:  J Mol Model       Date:  2008-04-02       Impact factor: 1.810

2.  Aromatic borozene.

Authors:  N Gonzalez Szwacki; V Weber; Cj Tymczak
Journal:  Nanoscale Res Lett       Date:  2009-06-11       Impact factor: 4.703

3.  Intermediate electrostatic field for the elongation method.

Authors:  Piotr Kuźniarowicz; Kai Liu; Yuriko Aoki; Feng Long Gu; Anna Stachowicz; Jacek Korchowiec
Journal:  J Mol Model       Date:  2014-05-31       Impact factor: 1.810

  3 in total

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