Literature DB >> 15471590

Dimensionality in cardiac modelling.

Alan Garny1, Denis Noble, Peter Kohl.   

Abstract

The development of mathematical models of the heart has been an ongoing concern for many decades. The initial focus of this work was on single cell models that incorporate varyingly detailed descriptions of the mechanisms that give rise to experimentally observed action potential shapes. Clinically relevant heart rhythm disturbances, however, are multicellular phenomena, and there have been many initiatives to develop multidimensional representations of cardiac electromechanical activity. Here, we discuss the merits of dimensionality, from 0D single cell models, to 1D cell strands, 2D planes and 3D volumes, for the simulation of normal and disturbed rhythmicity. We specifically look at models of: (i) the origin and spread of cardiac excitation from the sino-atrial node into atrial tissue, and (ii) stretch-activated channel effects on ventricular cell and tissue activity. Simulation of the spread of normal and disturbed cardiac excitation requires multicellular models. 1D architectures suffer from limitations in neighbouring tissue effects on individual cells, but they can (with some modification) be applied to the simulation of normal spread of excitation or, in ring-like structures, re-entry simulation (colliding wave fronts, tachycardia). 2D models overcome many of the limitations imposed by models of lower dimensionality, and can be applied to the study of complex co-existing re-entry patterns or even fibrillation. 3D implementations are closest to reality, as they allow investigation of scroll waves. Our results suggest that 2D models offer a good compromise between computational resources, complexity of electrophysiological models, and applicability to basic research, and that they should be considered as an important stepping-stone towards anatomically detailed simulations. This highlights the need to identify and use the most appropriate model for any given task. The notion of a single and ultimate model is as useful as the idea of a universal mechanical tool for all possible repairs and servicing requirements in daily life. The ideal model will be as simple as possible and as complex as necessary for the particular question raised.

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Year:  2005        PMID: 15471590     DOI: 10.1016/j.pbiomolbio.2004.06.006

Source DB:  PubMed          Journal:  Prog Biophys Mol Biol        ISSN: 0079-6107            Impact factor:   3.667


  10 in total

1.  A theory of biological relativity: no privileged level of causation.

Authors:  Denis Noble
Journal:  Interface Focus       Date:  2011-11-09       Impact factor: 3.906

Review 2.  Applications of artificial intelligence in cardiovascular imaging.

Authors:  Maxime Sermesant; Hervé Delingette; Hubert Cochet; Pierre Jaïs; Nicholas Ayache
Journal:  Nat Rev Cardiol       Date:  2021-03-12       Impact factor: 32.419

Review 3.  Biophysics and systems biology.

Authors:  Denis Noble
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2010-03-13       Impact factor: 4.226

4.  Three-dimensional histology: tools and application to quantitative assessment of cell-type distribution in rabbit heart.

Authors:  Rebecca A B Burton; Peter Lee; Ramón Casero; Alan Garny; Urszula Siedlecka; Jürgen E Schneider; Peter Kohl; Vicente Grau
Journal:  Europace       Date:  2014-11       Impact factor: 5.214

Review 5.  Application of cardiac electrophysiology simulations to pro-arrhythmic safety testing.

Authors:  Gary R Mirams; Mark R Davies; Yi Cui; Peter Kohl; Denis Noble
Journal:  Br J Pharmacol       Date:  2012-11       Impact factor: 8.739

6.  A simplified 3D model of whole heart electrical activity and 12-lead ECG generation.

Authors:  Siniša Sovilj; Ratko Magjarević; Nigel H Lovell; Socrates Dokos
Journal:  Comput Math Methods Med       Date:  2013-04-22       Impact factor: 2.238

Review 7.  Combining wet and dry research: experience with model development for cardiac mechano-electric structure-function studies.

Authors:  T Alexander Quinn; Peter Kohl
Journal:  Cardiovasc Res       Date:  2013-01-17       Impact factor: 10.787

8.  Systems biology and the virtual physiological human.

Authors:  Peter Kohl; Denis Noble
Journal:  Mol Syst Biol       Date:  2009-07-28       Impact factor: 11.429

Review 9.  The cardiac muscle duplex as a method to study myocardial heterogeneity.

Authors:  O Solovyova; L B Katsnelson; P V Konovalov; A G Kursanov; N A Vikulova; P Kohl; V S Markhasin
Journal:  Prog Biophys Mol Biol       Date:  2014-08-05       Impact factor: 3.667

10.  Myocardial slices come to age: an intermediate complexity in vitro cardiac model for translational research.

Authors:  Fotios G Pitoulis; Samuel A Watson; Filippo Perbellini; Cesare M Terracciano
Journal:  Cardiovasc Res       Date:  2020-06-01       Impact factor: 10.787

  10 in total

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