Literature DB >> 15471343

Strickler-Berg analysis of excited singlet state dynamics in DNA and RNA nucleosides.

Boiko Cohen1, Carlos E Crespo-Hernández, Bern Kohler.   

Abstract

The excited singlet state lifetime of the ribonucleoside uridine was found to be 210+/-30 fs by femtosecond transient absorption spectroscopy. This value is considerably shorter than all previous time-domain measurements. This result and our previous lifetime measurements [see J.-M. L. Pecourt, J. Peon and B. Kohler, J. Am. Chem. Soc., 2001, 123, 10 370] for the other common nucleosides are compared with lifetimes calculated from available photophysical data using the Strickler-Berg (SB) equation. The calculated lifetimes for pyrimidine nucleosides are 10-25% lower than the lifetimes measured in femtosecond transient absorption experiments. For the purine nucleosides, guanosine and adenosine, consideration of just the lowest 1pi --> pi* transition led to predicted lifetimes that are three times greater than experimental ones. On the other hand, inclusion of both of the lowest energy 1pi --> pi* absorption bands in the SB equation resulted in much better agreement with the experimental values. This suggests that both 1pi pi* states of the purine nucleosides contribute to their emission. Decay by the bright 1pi pi* state (or states, in the case of the purines) is believed to be responsible for the experimentally observed lifetimes.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15471343     DOI: 10.1039/b316939a

Source DB:  PubMed          Journal:  Faraday Discuss        ISSN: 1359-6640            Impact factor:   4.008


  6 in total

1.  Singlet excited-state dynamics of 5-fluorocytosine and Cytosine: an experimental and computational study.

Authors:  Lluís Blancafort; Boiko Cohen; Patrick M Hare; Bern Kohler; Michael A Robb
Journal:  J Phys Chem A       Date:  2005-05-26       Impact factor: 2.781

2.  Enzymatic interconversion of isomorphic fluorescent nucleosides: adenosine deaminase transforms an adenosine analogue into an inosine analogue.

Authors:  Renatus W Sinkeldam; Lisa S McCoy; Dongwon Shin; Yitzhak Tor
Journal:  Angew Chem Int Ed Engl       Date:  2013-11-29       Impact factor: 15.336

3.  On the origin of life in the zinc world: 1. Photosynthesizing, porous edifices built of hydrothermally precipitated zinc sulfide as cradles of life on Earth.

Authors:  Armen Y Mulkidjanian
Journal:  Biol Direct       Date:  2009-08-24       Impact factor: 4.540

4.  Measurements of complex refractive index change of photoactive yellow protein over a wide wavelength range using hyperspectral quantitative phase imaging.

Authors:  KyeoReh Lee; Youngmin Kim; JaeHwang Jung; Hyotcherl Ihee; YongKeun Park
Journal:  Sci Rep       Date:  2018-02-15       Impact factor: 4.379

5.  Tracking excited state decay mechanisms of pyrimidine nucleosides in real time.

Authors:  Rocío Borrego-Varillas; Artur Nenov; Piotr Kabaciński; Irene Conti; Lucia Ganzer; Aurelio Oriana; Vishal Kumar Jaiswal; Ines Delfino; Oliver Weingart; Cristian Manzoni; Ivan Rivalta; Marco Garavelli; Giulio Cerullo
Journal:  Nat Commun       Date:  2021-12-14       Impact factor: 14.919

6.  Excimer Intermediates en Route to Long-Lived Charge-Transfer States in Single-Stranded Adenine DNA as Revealed by Nonadiabatic Dynamics.

Authors:  Lea M Ibele; Pedro A Sánchez-Murcia; Sebastian Mai; Juan J Nogueira; Leticia González
Journal:  J Phys Chem Lett       Date:  2020-08-26       Impact factor: 6.475

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.