Literature DB >> 15470454

Two-dimensional annotation of genomes.

Bernhard Palsson1.   

Abstract

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Year:  2004        PMID： 15470454     DOI： 10.1038/nbt1004-1218

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN： 1087-0156            Impact factor:   54.908


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  24 in total

Review 1.  Biochemical and statistical network models for systems biology.

Authors:  Nathan D Price; Ilya Shmulevich
Journal:  Curr Opin Biotechnol       Date:  2007-08-03       Impact factor: 9.740

2.  Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2.0.

Authors:  Jan Schellenberger; Richard Que; Ronan M T Fleming; Ines Thiele; Jeffrey D Orth; Adam M Feist; Daniel C Zielinski; Aarash Bordbar; Nathan E Lewis; Sorena Rahmanian; Joseph Kang; Daniel R Hyduke; Bernhard Ø Palsson
Journal:  Nat Protoc       Date:  2011-08-04       Impact factor: 13.491

Review 3.  Analysis of omics data with genome-scale models of metabolism.

Authors:  Daniel R Hyduke; Nathan E Lewis; Bernhard Ø Palsson
Journal:  Mol Biosyst       Date:  2012-12-18

4.  Reconstruction annotation jamborees: a community approach to systems biology.

Authors:  Ines Thiele; Bernhard Ø Palsson
Journal:  Mol Syst Biol       Date:  2010-04-13       Impact factor: 11.429

5.  Insight into human alveolar macrophage and M. tuberculosis interactions via metabolic reconstructions.

Authors:  Aarash Bordbar; Nathan E Lewis; Jan Schellenberger; Bernhard Ø Palsson; Neema Jamshidi
Journal:  Mol Syst Biol       Date:  2010-10-19       Impact factor: 11.429

Review 6.  Studying Salmonellae and Yersiniae host-pathogen interactions using integrated 'omics and modeling.

Authors:  Charles Ansong; Brooke L Deatherage; Daniel Hyduke; Brian Schmidt; Jason E McDermott; Marcus B Jones; Sadhana Chauhan; Pep Charusanti; Young-Mo Kim; Ernesto S Nakayasu; Jie Li; Afshan Kidwai; George Niemann; Roslyn N Brown; Thomas O Metz; Kathleen McAteer; Fred Heffron; Scott N Peterson; Vladimir Motin; Bernhard O Palsson; Richard D Smith; Joshua N Adkins
Journal:  Curr Top Microbiol Immunol       Date:  2013       Impact factor: 4.291

Review 7.  Metabolic systems biology.

Authors:  Bernhard Palsson
Journal:  FEBS Lett       Date:  2009-12-17       Impact factor: 4.124

8.  Metabolomics- and proteomics-assisted genome annotation and analysis of the draft metabolic network of Chlamydomonas reinhardtii.

Authors:  Patrick May; Stefanie Wienkoop; Stefan Kempa; Björn Usadel; Nils Christian; Jens Rupprecht; Julia Weiss; Luis Recuenco-Munoz; Oliver Ebenhöh; Wolfram Weckwerth; Dirk Walther
Journal:  Genetics       Date:  2008-05       Impact factor: 4.562

Review 9.  Reconstruction of biochemical networks in microorganisms.

Authors:  Adam M Feist; Markus J Herrgård; Ines Thiele; Jennie L Reed; Bernhard Ø Palsson
Journal:  Nat Rev Microbiol       Date:  2008-12-31       Impact factor: 60.633

Review 10.  Bacteria as computers making computers.

Authors:  Antoine Danchin
Journal:  FEMS Microbiol Rev       Date:  2008-11-07       Impact factor: 16.408
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