Literature DB >> 15467393

Construction of a human glycogene library and comprehensive functional analysis.

Hisashi Narimatsu1.   

Abstract

Eighteen years have passed after the first mammalian glycosyltransferase was cloned. At the beginning of April, 2001, 110 genes for human glycosyltransferases, including modifying enzymes for carbohydrate chains such as sulfotransferases, had been cloned and analyzed. We started the Glycogene Project (GG project) in April 2001, a comprehensive study on human glycogenes with the aid of bioinformatic technology. The term glycogene includes the genes for glycosyltransferases, sulfotransferases adding sulfate to carbohydrates and sugar-nucleotide transporters, etc. Firstly, as many novel genes, which are the candidates for glycogenes, as possible were searched using bioinformatic technology in databases. They were then cloned and expressed in various expression systems to detect the activity for carbohydrate synthesis. Their substrate specificity was determined using various acceptors.

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Year:  2004        PMID: 15467393     DOI: 10.1023/B:GLYC.0000043742.99482.01

Source DB:  PubMed          Journal:  Glycoconj J        ISSN: 0282-0080            Impact factor:   2.916


  66 in total

1.  Characterization of a heparan sulfate 3-O-sulfotransferase-5, an enzyme synthesizing a tetrasulfated disaccharide.

Authors:  Hideo Mochizuki; Keiichi Yoshida; Masanori Gotoh; Shigemi Sugioka; Norihiro Kikuchi; Yeon-Dae Kwon; Akira Tawada; Kennichi Maeyama; Niro Inaba; Toru Hiruma; Koji Kimata; Hisashi Narimatsu
Journal:  J Biol Chem       Date:  2003-05-09       Impact factor: 5.157

Review 2.  Glycosyltransferases. Structure, localization, and control of cell type-specific glycosylation.

Authors:  J C Paulson; K J Colley
Journal:  J Biol Chem       Date:  1989-10-25       Impact factor: 5.157

Review 3.  Recent progress in molecular cloning of glycosyltransferase genes of eukaryotes.

Authors:  H Narimatsu
Journal:  Microbiol Immunol       Date:  1994       Impact factor: 1.955

4.  Molecular cloning and expression of a second chondroitin N-acetylgalactosaminyltransferase involved in the initiation and elongation of chondroitin/dermatan sulfate.

Authors:  Toru Uyama; Hiroshi Kitagawa; Junko Tanaka; Jun-ichi Tamura; Tomoya Ogawa; Kazuyuki Sugahara
Journal:  J Biol Chem       Date:  2002-11-13       Impact factor: 5.157

5.  Functional conservation of subfamilies of putative UDP-N-acetylgalactosamine:polypeptide N-acetylgalactosaminyltransferases in Drosophila, Caenorhabditis elegans, and mammals. One subfamily composed of l(2)35Aa is essential in Drosophila.

Authors:  Tilo Schwientek; Eric P Bennett; Carlos Flores; John Thacker; Martin Hollmann; Celso A Reis; Jane Behrens; Ulla Mandel; Birgit Keck; Mireille A Schäfer; Kim Haselmann; Roman Zubarev; Peter Roepstorff; Joy M Burchell; Joyce Taylor-Papadimitriou; Michael A Hollingsworth; Henrik Clausen
Journal:  J Biol Chem       Date:  2002-03-29       Impact factor: 5.157

6.  Cloning and characterization of a close homologue of human UDP-N-acetyl-alpha-D-galactosamine:Polypeptide N-acetylgalactosaminyltransferase-T3, designated GalNAc-T6. Evidence for genetic but not functional redundancy.

Authors:  E P Bennett; H Hassan; U Mandel; M A Hollingsworth; N Akisawa; Y Ikematsu; G Merkx; A G van Kessel; S Olofsson; H Clausen
Journal:  J Biol Chem       Date:  1999-09-03       Impact factor: 5.157

7.  Molecular cloning and enzymatic characterization of a UDP-GalNAc:GlcNAc(beta)-R beta1,4-N-acetylgalactosaminyltransferase from Caenorhabditis elegans.

Authors:  Ziad S Kawar; Irma Van Die; Richard D Cummings
Journal:  J Biol Chem       Date:  2002-07-11       Impact factor: 5.157

8.  Molecular cloning and characterization of a human multisubstrate specific nucleotide-sugar transporter homologous to Drosophila fringe connection.

Authors:  Takeshi Suda; Shin Kamiyama; Masayuki Suzuki; Norihiro Kikuchi; Ken-Ichi Nakayama; Hisashi Narimatsu; Yoshifumi Jigami; Tatsuya Aoki; Shoko Nishihara
Journal:  J Biol Chem       Date:  2004-04-13       Impact factor: 5.157

9.  Chondroitin sulfate synthase-2. Molecular cloning and characterization of a novel human glycosyltransferase homologous to chondroitin sulfate glucuronyltransferase, which has dual enzymatic activities.

Authors:  Toshikazu Yada; Masanori Gotoh; Takashi Sato; Masafumi Shionyu; Mitiko Go; Hiromi Kaseyama; Hiroko Iwasaki; Norihiro Kikuchi; Yeon-Dae Kwon; Akira Togayachi; Takashi Kudo; Hideto Watanabe; Hisashi Narimatsu; Koji Kimata
Journal:  J Biol Chem       Date:  2003-05-20       Impact factor: 5.157

10.  Cloning and characterization of a novel UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase, pp-GalNAc-T14.

Authors:  Han Wang; Kouichi Tachibana; Yan Zhang; Hiroko Iwasaki; Akihiko Kameyama; Lamei Cheng; Jian ming Guo; Toru Hiruma; Akira Togayachi; Takashi Kudo; Norihiro Kikuchi; Hisashi Narimatsu
Journal:  Biochem Biophys Res Commun       Date:  2003-01-17       Impact factor: 3.575

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  23 in total

Review 1.  Using databases and web resources for glycomics research.

Authors:  Kiyoko F Aoki-Kinoshita
Journal:  Mol Cell Proteomics       Date:  2013-01-16       Impact factor: 5.911

2.  Functional states of homooligomers: insights from the evolution of glycosyltransferases.

Authors:  Kosuke Hashimoto; Thomas Madej; Stephen H Bryant; Anna R Panchenko
Journal:  J Mol Biol       Date:  2010-04-08       Impact factor: 5.469

3.  Construction of a library of human glycosyltransferases immobilized in the cell wall of Saccharomyces cerevisiae.

Authors:  Yoh-Ichi Shimma; Fumie Saito; Fumi Oosawa; Yoshifumi Jigami
Journal:  Appl Environ Microbiol       Date:  2006-08-25       Impact factor: 4.792

4.  A heterozygous mutation of GALNTL5 affects male infertility with impairment of sperm motility.

Authors:  Nobuyoshi Takasaki; Kouichi Tachibana; Satoshi Ogasawara; Hideki Matsuzaki; Jun Hagiuda; Hiromichi Ishikawa; Keiji Mochida; Kimiko Inoue; Narumi Ogonuki; Atsuo Ogura; Toshiaki Noce; Chizuru Ito; Kiyotaka Toshimori; Hisashi Narimatsu
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-07       Impact factor: 11.205

Review 5.  Glycobiology of the ocular surface: mucins and lectins.

Authors:  Pablo Argüeso
Journal:  Jpn J Ophthalmol       Date:  2013-01-17       Impact factor: 2.447

6.  RNAi screening of human glycogene orthologs in the nematode Caenorhabditis elegans and the construction of the C. elegans glycogene database.

Authors:  Sayaka Akiyoshi; Kazuko H Nomura; Katsufumi Dejima; Daisuke Murata; Ayako Matsuda; Nanako Kanaki; Tetsuro Takaki; Hiroyuki Mihara; Takayuki Nagaishi; Shuhei Furukawa; Keiko-Gengyo Ando; Sawako Yoshina; Shohei Mitani; Akira Togayachi; Yoshinori Suzuki; Toshihide Shikanai; Hisashi Narimatsu; Kazuya Nomura
Journal:  Glycobiology       Date:  2014-08-04       Impact factor: 4.313

7.  Glycogene expression in conjunctiva of patients with dry eye: downregulation of Notch signaling.

Authors:  Flavio Mantelli; Lana Schaffer; Reza Dana; Steven R Head; Pablo Argüeso
Journal:  Invest Ophthalmol Vis Sci       Date:  2008-11-14       Impact factor: 4.799

8.  A systems biology approach reveals common metastatic pathways in osteosarcoma.

Authors:  Ricardo J Flores; Yiting Li; Alexander Yu; Jianhe Shen; Pulivarthi H Rao; Serrine S Lau; Marina Vannucci; Ching C Lau; Tsz-Kwong Man
Journal:  BMC Syst Biol       Date:  2012-05-28

9.  Hyperlink Management System and ID Converter System: enabling maintenance-free hyperlinks among major biological databases.

Authors:  Tadashi Imanishi; Hajime Nakaoka
Journal:  Nucleic Acids Res       Date:  2009-05-19       Impact factor: 16.971

10.  H-InvDB in 2009: extended database and data mining resources for human genes and transcripts.

Authors:  Chisato Yamasaki; Katsuhiko Murakami; Jun-ichi Takeda; Yoshiharu Sato; Akiko Noda; Ryuichi Sakate; Takuya Habara; Hajime Nakaoka; Fusano Todokoro; Akihiro Matsuya; Tadashi Imanishi; Takashi Gojobori
Journal:  Nucleic Acids Res       Date:  2009-11-23       Impact factor: 16.971

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