Literature DB >> 154673

Interesting and unusual features in the sequence of Neurospora crassa mitochondrial tyrosine transfer RNA.

J E Heckman, B Alzner-Deweerd, U L RajBhandary.   

Abstract

The mitochondrial tyrosine tRNA from Neurospora crassa has been sequenced and found to have several interesting features: (i) It resembles prokaryotic rather than eukaryotic tyrosine tRNAs in that it possesses a large variable loop (loop III); moreover, it can be quantitatively aminoacylated by Escherichia coli tyrosyl-tRNA synthetase but not by yeast tyrosyl-tRNA synthetase. (ii) This tRNA differs from all tRNA's sequenced to date in lacking the A residue at position 14 and the constant purine residue at position 15, two nucleosides that have been found so far in loop I of all tRNA's and that have been implicated in base-base tertiary interactions, respectively, with the universal U residue at position 8 and the constant pyrimidine residue at the end of loop III. (iii) Unlike the N. crassa mitochondrial initiator tRNA, this tRNA contains the usual TpsiC sequence in loop IV and the highly conserved GG sequence in loop I common to other tRNAs.

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Year:  1979        PMID: 154673      PMCID: PMC383028          DOI: 10.1073/pnas.76.2.717

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

1.  Structure of yeast phenylalanine tRNA at 3 A resolution.

Authors:  J D Robertus; J E Ladner; J T Finch; D Rhodes; R S Brown; B F Clark; A Klug
Journal:  Nature       Date:  1974-08-16       Impact factor: 49.962

2.  Three-dimensional tertiary structure of yeast phenylalanine transfer RNA.

Authors:  S H Kim; F L Suddath; G J Quigley; A McPherson; J L Sussman; A H Wang; N C Seeman; A Rich
Journal:  Science       Date:  1974-08-02       Impact factor: 47.728

3.  Mitochondrial RNA in Xenopus laevis. II. Molecular weights and other physical properties of mitochondrial ribosomal and 4 s RNA.

Authors:  I B Dawid; J W Chase
Journal:  J Mol Biol       Date:  1972-01-28       Impact factor: 5.469

4.  Absence of the sequence G-T-psi-C-G(A)- in several eukaryotic cytoplasmic initiator transfer RNAs.

Authors:  M Simsek; J Ziegenmeyer; J Heckman; U L Rajbhandary
Journal:  Proc Natl Acad Sci U S A       Date:  1973-04       Impact factor: 11.205

5.  Comparison of cytoplasmic and mitochondrial 4 S RNA from cultured hamster cells: physical and metabolic properties.

Authors:  D T Dubin; D A Friend
Journal:  J Mol Biol       Date:  1972-11-14       Impact factor: 5.469

6.  Structures of two glycyl-tRNAs from Staphylococcus epidermidis.

Authors:  R J Roberts
Journal:  Nat New Biol       Date:  1972-05-10

7.  Partial digestion with ribonuclease T 1 and derivation of the complete sequence of tyrosine transfer ribonucleic acid from Torulopsis utilis.

Authors:  S Hashimoto; S Takemura; M Miyazaki
Journal:  J Biochem       Date:  1972-07       Impact factor: 3.387

8.  A ribonuclease from Physarum. Biochemical properties and synthesis in the mitotic cycle.

Authors:  R Braun; K Behrens
Journal:  Biochim Biophys Acta       Date:  1969-11-19

9.  A two-dimensional fractionation procedure for radioactive nucleotides.

Authors:  F Sanger; G G Brownlee; B G Barrell
Journal:  J Mol Biol       Date:  1965-09       Impact factor: 5.469

10.  Formylatable methionine transfer RNA from Mycoplasma: purification and comparison of partial nucleotide sequences with those of other prokaryotic initiator tRNAs.

Authors:  R T Walker; U L RajBhandary
Journal:  Nucleic Acids Res       Date:  1975-01       Impact factor: 16.971

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  20 in total

1.  Genomic DNA sequences of mitochondrial tRNA genes in fungi Penicillium chrysogenum KCTC1262: tRNA(arg), tRNA(asn) and tRNA(tyr) genes.

Authors:  J Sheen; S Kim; Y H Kho; K S Bae
Journal:  Nucleic Acids Res       Date:  1992-11-11       Impact factor: 16.971

2.  Compilation of tRNA sequences and sequences of tRNA genes.

Authors:  M Sprinzl; N Dank; S Nock; A Schön
Journal:  Nucleic Acids Res       Date:  1991-04-25       Impact factor: 16.971

3.  The Mauriceville retroplasmid reverse transcriptase initiates cDNA synthesis de novo at the 3' end of tRNAs.

Authors:  C C Chiang; A M Lambowitz
Journal:  Mol Cell Biol       Date:  1997-08       Impact factor: 4.272

Review 4.  Distribution and frequencies of post-transcriptional modifications in tRNAs.

Authors:  Magdalena A Machnicka; Anna Olchowik; Henri Grosjean; Janusz M Bujnicki
Journal:  RNA Biol       Date:  2014       Impact factor: 4.652

5.  Characterization of mutant mitochondrial plasmids of Neurospora spp. that have incorporated tRNAs by reverse transcription.

Authors:  R A Akins; R L Kelley; A M Lambowitz
Journal:  Mol Cell Biol       Date:  1989-02       Impact factor: 4.272

6.  Evolution of methionine initiator and phenylalanine transfer RNAs.

Authors:  B Larue; R J Cedergren; D Sankoff; H Grosjean
Journal:  J Mol Evol       Date:  1979-12       Impact factor: 2.395

Review 7.  Has the endosymbiont hypothesis been proven?

Authors:  M W Gray; W F Doolittle
Journal:  Microbiol Rev       Date:  1982-03

8.  The nucleotide sequence of phenylalanine tRNA from the cytoplasm of Neurospora crassa.

Authors:  B Alzner-DeWeerd; L I Hecker; W E Barnett; U L RajBhandary
Journal:  Nucleic Acids Res       Date:  1980-03-11       Impact factor: 16.971

9.  Nucleotide sequence of Aspergillus nidulans mitochondrial genes coding for ATPase subunit 6, cytochrome oxidase subunit 3, seven unidentified proteins, four tRNAs and L-rRNA.

Authors:  R Netzker; H G Köchel; N Basak; H Küntzel
Journal:  Nucleic Acids Res       Date:  1982-08-11       Impact factor: 16.971

10.  The [poky] mutant of Neurospora contains a 4-base-pair deletion at the 5' end of the mitochondrial small rRNA.

Authors:  R A Akins; A M Lambowitz
Journal:  Proc Natl Acad Sci U S A       Date:  1984-06       Impact factor: 11.205

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