Literature DB >> 15459332

Effect of sodium dodecyl sulfate on folding and thermal stability of acid-denatured cytochrome c: a spectroscopic approach.

Qi Xu1, Timothy A Keiderling.   

Abstract

The molten globule (MG) state can be an intermediate in the protein folding pathway; thus, its detailed description can help understanding protein folding. Sodium dodecyl sulfate (SDS), an anionic surfactant that is commonly used to mimic hydrophobic binding environments such as cell membranes, is known to denature some native state proteins, including horse cytochrome c (cyt c). In this article, refolding of acid denatured cyt c is studied under the influence of SDS to form MG-like states at both low concentration and above the critical micelle concentration using Fourier transform Infrared (FTIR) and ultraviolet and visible absorption as well as fluorescence and circular dichroism (CD). Thermal denaturation monitored with FTIR and CD shows distinct final high temperature states starting from MG-like states formed with different SDS/protein ratios. The results suggest that the SDS/protein ratio as well as the actual SDS (or protein) concentration affects structure and its thermal stability. Thermal denaturation monitored with CD and FTIR for cyt c at neutral pH but denatured with SDS showed that at a high SDS/protein ratio, the thermal behavior of MG-like states formed at low and neutral pH are quite similar. Based on the results obtained, the merits of two models of the protein-surfactant structure are discussed for different SDS concentrations.

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Year:  2004        PMID: 15459332      PMCID: PMC2286590          DOI: 10.1110/ps.04827604

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  45 in total

1.  Ferricytochrome c chain folding measured by the energy transfer of tryptophan 59 to the heme group.

Authors:  T Y Tsong
Journal:  Biochemistry       Date:  1976-12-14       Impact factor: 3.162

2.  Kinetics and mechanism of the folding of cytochrome c.

Authors:  K M Pryse; T G Bruckman; B W Maxfield; E L Elson
Journal:  Biochemistry       Date:  1992-06-09       Impact factor: 3.162

3.  Protective effect of small amounts of sodium dodecyl sulfate on the helical structure of bovine serum albumin in thermal denaturation.

Authors:  Yoshiko Moriyama; Yoshie Kawasaka; Kunio Takeda
Journal:  J Colloid Interface Sci       Date:  2003-01-01       Impact factor: 8.128

4.  The gross conformation of protein-sodium dodecyl sulfate complexes.

Authors:  J A Reynolds; C Tanford
Journal:  J Biol Chem       Date:  1970-10-10       Impact factor: 5.157

5.  Protein folding intermediates: native-state hydrogen exchange.

Authors:  Y Bai; T R Sosnick; L Mayne; S W Englander
Journal:  Science       Date:  1995-07-14       Impact factor: 47.728

6.  Manipulation of the observed kinetic phases in the refolding of denatured ferricytochromes c.

Authors:  D N Brems; E Stellwagen
Journal:  J Biol Chem       Date:  1983-03-25       Impact factor: 5.157

7.  Ligand exchange during unfolding of cytochrome c.

Authors:  S R Yeh; D L Rousseau
Journal:  J Biol Chem       Date:  1999-06-18       Impact factor: 5.157

Review 8.  Structural description of acid-denatured cytochrome c by hydrogen exchange and 2D NMR.

Authors:  M F Jeng; S W Englander; G A Elöve; A J Wand; H Roder
Journal:  Biochemistry       Date:  1990-11-20       Impact factor: 3.162

9.  Stabilization of partially folded states of cytochrome c in aqueous surfactant: effects of ionic and hydrophobic interactions.

Authors:  Krishnananda Chattopadhyay; Shyamalava Mazumdar
Journal:  Biochemistry       Date:  2003-12-16       Impact factor: 3.162

10.  Cooperative binding of hexadecyltrimethylammonium chloride and sodium dodecyl sulfate to cytochrome c and the resultant change in protein conformation.

Authors:  K Hiramatsu; J T Yang
Journal:  Biochim Biophys Acta       Date:  1983-02-28
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  9 in total

1.  Differentiation of proteins based on characteristic patterns of association and denaturation in solutions of SDS.

Authors:  Katherine L Gudiksen; Irina Gitlin; George M Whitesides
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-12       Impact factor: 11.205

2.  Mechanistic investigation of domain specific unfolding of human serum albumin and the effect of sucrose.

Authors:  Rajeev Yadav; Pratik Sen
Journal:  Protein Sci       Date:  2013-09-18       Impact factor: 6.725

3.  The non-native conformations of cytochrome c in sodium dodecyl sulfate and their modulation by ATP.

Authors:  Unnati Ahluwalia; Shahid M Nayeem; Shashank Deep
Journal:  Eur Biophys J       Date:  2010-11-30       Impact factor: 1.733

4.  Characterizing the Structure and Oligomerization of Major Royal Jelly Protein 1 (MRJP1) by Mass Spectrometry and Complementary Biophysical Tools.

Authors:  Samuel C Mandacaru; Luis H F do Vale; Siavash Vahidi; Yiming Xiao; Owen S Skinner; Carlos A O Ricart; Neil L Kelleher; Marcelo Valle de Sousa; Lars Konermann
Journal:  Biochemistry       Date:  2017-03-07       Impact factor: 3.162

5.  Sorbitol counteracts temperature- and chemical-induced denaturation of a recombinant α-amylase from alkaliphilic Bacillus sp. TS-23.

Authors:  Meng-Chun Chi; Tai-Jung Wu; Hsing-Ling Chen; Huei-Fen Lo; Long-Liu Lin
Journal:  J Ind Microbiol Biotechnol       Date:  2012-08-12       Impact factor: 3.346

6.  Dilution of protein-surfactant complexes: a fluorescence study.

Authors:  Glareh Azadi; Anuj Chauhan; Anubhav Tripathi
Journal:  Protein Sci       Date:  2013-08-06       Impact factor: 6.725

7.  Increasing the net charge and decreasing the hydrophobicity of bovine carbonic anhydrase decreases the rate of denaturation with sodium dodecyl sulfate.

Authors:  Katherine L Gudiksen; Irina Gitlin; Demetri T Moustakas; George M Whitesides
Journal:  Biophys J       Date:  2006-04-14       Impact factor: 4.033

8.  Molecular Insight into Human Lysozyme and Its Ability to Form Amyloid Fibrils in High Concentrations of Sodium Dodecyl Sulfate: A View from Molecular Dynamics Simulations.

Authors:  Majid Jafari; Faramarz Mehrnejad
Journal:  PLoS One       Date:  2016-10-21       Impact factor: 3.240

9.  Investigation on the self-assembly of the NFL-TBS.40-63 peptide and its interaction with gold nanoparticles as a delivery agent for glioblastoma.

Authors:  H Alnemeh-Al Ali; A Griveau; F Artzner; A Dupont; N Lautram; M A Jourdain; J Eyer
Journal:  Int J Pharm X       Date:  2022-09-22
  9 in total

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