Literature DB >> 15458157

Engineering and algorithm design for an image processing Api: a technical report on ITK--the Insight Toolkit.

Terry S Yoo1, Michael J Ackerman, William E Lorensen, Will Schroeder, Vikram Chalana, Stephen Aylward, Dimitris Metaxas, Ross Whitaker.   

Abstract

We present the detailed planning and execution of the Insight Toolkit (ITK), an application programmers interface (API) for the segmentation and registration of medical image data. This public resource has been developed through the NLM Visible Human Project, and is in beta test as an open-source software offering under cost-free licensing. The toolkit concentrates on 3D medical data segmentation and registration algorithms, multimodal and multiresolution capabilities, and portable platform independent support for Windows, Linux/Unix systems. This toolkit was built using current practices in software engineering. Specifically, we embraced the concept of generic programming during the development of these tools, working extensively with C++ templates and the freedom and flexibility they allow. Software development tools for distributed consortium-based code development have been created and are also publicly available. We discuss our assumptions, design decisions, and some lessons learned.

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Year:  2002        PMID: 15458157

Source DB:  PubMed          Journal:  Stud Health Technol Inform        ISSN: 0926-9630


  203 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-17       Impact factor: 11.205

2.  BioImageXD: an open, general-purpose and high-throughput image-processing platform.

Authors:  Pasi Kankaanpää; Lassi Paavolainen; Silja Tiitta; Mikko Karjalainen; Joacim Päivärinne; Jonna Nieminen; Varpu Marjomäki; Jyrki Heino; Daniel J White
Journal:  Nat Methods       Date:  2012-06-28       Impact factor: 28.547

3.  Analysis of the micro-migration of sliding hip screws by using point-based registration.

Authors:  Patrik Raudaschl; Karl Fritscher; Tobias Roth; Christian Kammerlander; Rainer Schubert
Journal:  Int J Comput Assist Radiol Surg       Date:  2010-06-23       Impact factor: 2.924

4.  Virtual machine performance benchmarking.

Authors:  Steve G Langer; Todd French
Journal:  J Digit Imaging       Date:  2011-10       Impact factor: 4.056

5.  Multi-object segmentation framework using deformable models for medical imaging analysis.

Authors:  Rafael Namías; Juan Pablo D'Amato; Mariana Del Fresno; Marcelo Vénere; Nicola Pirró; Marc-Emmanuel Bellemare
Journal:  Med Biol Eng Comput       Date:  2015-09-21       Impact factor: 2.602

6.  Multimodal image fusion with SIMS: Preprocessing with image registration.

Authors:  Jay Gage Tarolli; Anna Bloom; Nicholas Winograd
Journal:  Biointerphases       Date:  2016-06-14       Impact factor: 2.456

7.  Imaging texture analysis for automated prediction of lung cancer recurrence after stereotactic radiotherapy.

Authors:  Sarah A Mattonen; Shyama Tetar; David A Palma; Alexander V Louie; Suresh Senan; Aaron D Ward
Journal:  J Med Imaging (Bellingham)       Date:  2015-11-12

Review 8.  Radiomics in precision medicine for lung cancer.

Authors:  Julie Constanzo; Lise Wei; Huan-Hsin Tseng; Issam El Naqa
Journal:  Transl Lung Cancer Res       Date:  2017-12

9.  Efficient semi-automatic 3D segmentation for neuron tracing in electron microscopy images.

Authors:  Cory Jones; Ting Liu; Nathaniel Wood Cohan; Mark Ellisman; Tolga Tasdizen
Journal:  J Neurosci Methods       Date:  2015-03-10       Impact factor: 2.390

10.  Next Generation Histology-Directed Imaging Mass Spectrometry Driven by Autofluorescence Microscopy.

Authors:  Nathan Heath Patterson; Michael Tuck; Adam Lewis; Alexis Kaushansky; Jeremy L Norris; Raf Van de Plas; Richard M Caprioli
Journal:  Anal Chem       Date:  2018-10-16       Impact factor: 6.986

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