Literature DB >> 15457533

The systems biology of glycosylation.

Michael P Murrell1, Kevin J Yarema, Andre Levchenko.   

Abstract

Glycosylation can have a profound influence on the function of a variety of eukaryotic cells. In particular, it can affect signal transduction and cell-cell communication properties and thus shape critical cell decisions, including the regulation of differentiation and apoptosis. Regulation of glycosylation has multiple layers of complexity, both structural and functional, which make its experimental and theoretical analysis difficult to perform and interpret. Novel research methodologies provided by systems biology can help to address many outstanding issues and integrate glycosylation with other metabolic and cell regulation processes. Here we review the toolbox available for biochemical systems analysis of glycosylation.

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Year:  2004        PMID: 15457533     DOI: 10.1002/cbic.200400143

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  15 in total

1.  Genetic characterization, molecular epidemiology, and phylogenetic relationships of insect-specific viruses in the taxon Negevirus.

Authors:  Marcio R T Nunes; María Angélica Contreras-Gutierrez; Hilda Guzman; Livia C Martins; Mayla Feitoza Barbirato; Chelsea Savit; Victoria Balta; Sandra Uribe; Rafael Vivero; Juan David Suaza; Hamilton Oliveira; Joaquin P Nunes Neto; Valeria L Carvalho; Sandro Patroca da Silva; Jedson F Cardoso; Rodrigo Santo de Oliveira; Poliana da Silva Lemos; Thomas G Wood; Steven G Widen; Pedro F C Vasconcelos; Durland Fish; Nikos Vasilakis; Robert B Tesh
Journal:  Virology       Date:  2017-02-11       Impact factor: 3.616

Review 2.  Software for automated interpretation of mass spectrometry data from glycans and glycopeptides.

Authors:  Carrie L Woodin; Morgan Maxon; Heather Desaire
Journal:  Analyst       Date:  2013-05-21       Impact factor: 4.616

3.  The annotation of the asparagine N-linked glycosylation pathway in the Reactome database.

Authors:  Giovanni Marco Dall'Olio; Bijay Jassal; Ludovica Montanucci; Pascal Gagneux; Jaume Bertranpetit; Hafid Laayouni
Journal:  Glycobiology       Date:  2011-01-02       Impact factor: 4.313

4.  Therapeutic Monosaccharides: Looking Back, Moving Forward.

Authors:  Paulina Sosicka; Bobby G Ng; Hudson H Freeze
Journal:  Biochemistry       Date:  2019-08-22       Impact factor: 3.162

5.  GlycoPep grader: a web-based utility for assigning the composition of N-linked glycopeptides.

Authors:  Carrie L Woodin; David Hua; Morgan Maxon; Kathryn R Rebecchi; Eden P Go; Heather Desaire
Journal:  Anal Chem       Date:  2012-05-21       Impact factor: 6.986

Review 6.  Understanding glycomechanics using mathematical modeling: a review of current approaches to simulate cellular glycosylation reaction networks.

Authors:  Apurv Puri; Sriram Neelamegham
Journal:  Ann Biomed Eng       Date:  2011-11-17       Impact factor: 3.934

7.  Aerosol delivery of lentivirus-mediated O-glycosylation mutant osteopontin suppresses lung tumorigenesis in K-ras (LA1) mice.

Authors:  Arash Minai-Tehrani; Seung-Hee Chang; Jung-Taek Kwon; Soon-Kyung Hwang; Ji-Eun Kim; Ji-Young Shin; Kyeong-Nam Yu; Sung-Jin Park; Hu-Lin Jiang; Ji-Hye Kim; Seong-Ho Hong; Bitna Kang; Duyeoul Kim; Chan-Hee Chae; Kee-Ho Lee; George R Beck; Myung-Haing Cho
Journal:  Cell Oncol (Dordr)       Date:  2012-10-16       Impact factor: 6.730

8.  Hexosamine template. A platform for modulating gene expression and for sugar-based drug discovery.

Authors:  Noha Elmouelhi; Udayanath Aich; Venkata D P Paruchuri; M Adam Meledeo; Christopher T Campbell; Jean J Wang; Raja Srinivas; Hargun S Khanna; Kevin J Yarema
Journal:  J Med Chem       Date:  2009-04-23       Impact factor: 7.446

Review 9.  Metabolic glycoengineering: sialic acid and beyond.

Authors:  Jian Du; M Adam Meledeo; Zhiyun Wang; Hargun S Khanna; Venkata D P Paruchuri; Kevin J Yarema
Journal:  Glycobiology       Date:  2009-08-12       Impact factor: 4.313

10.  Centralized modularity of N-linked glycosylation pathways in mammalian cells.

Authors:  Pan-Jun Kim; Dong-Yup Lee; Hawoong Jeong
Journal:  PLoS One       Date:  2009-10-05       Impact factor: 3.240

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