Literature DB >> 15456964

Recent advances in gel-based proteome profiling techniques.

Yi Hu1, Xuan Huang, Grace Y J Chen, Shao Q Yao.   

Abstract

This review focuses on recent developments in gel-based proteomics techniques. By combining traditional sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and two-dimensional gel electrophoretic techniques with recent advances in protein labeling using different classes of molecules (i.e., fluorescent dyes, chemical probes, radioisotopes), new technologies have been developed that allow for high-throughput studies of proteins at the whole-proteome scale.

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Year:  2004        PMID: 15456964     DOI: 10.1385/MB:28:1:63

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  54 in total

Review 1.  Genomics, gene expression and DNA arrays.

Authors:  D J Lockhart; E A Winzeler
Journal:  Nature       Date:  2000-06-15       Impact factor: 49.962

Review 2.  The application of mass spectrometry to membrane proteomics.

Authors:  Christine C Wu; John R Yates
Journal:  Nat Biotechnol       Date:  2003-03       Impact factor: 54.908

3.  Isolation of protein subpopulations undergoing protein-protein interactions.

Authors:  Thomas J Nelson; Peter S Backlund; Alfred L Yergey; Daniel L Alkon
Journal:  Mol Cell Proteomics       Date:  2002-03       Impact factor: 5.911

4.  Reversed-phase high-performance liquid chromatography prefractionation prior to two-dimensional difference gel electrophoresis and mass spectrometry identifies new differentially expressed proteins between striate cortex of kitten and adult cat.

Authors:  Gert Van den Bergh; Stefan Clerens; Frans Vandesande; Lutgarde Arckens
Journal:  Electrophoresis       Date:  2003-05       Impact factor: 3.535

5.  Functional organization of the yeast proteome by systematic analysis of protein complexes.

Authors:  Anne-Claude Gavin; Markus Bösche; Roland Krause; Paola Grandi; Martina Marzioch; Andreas Bauer; Jörg Schultz; Jens M Rick; Anne-Marie Michon; Cristina-Maria Cruciat; Marita Remor; Christian Höfert; Malgorzata Schelder; Miro Brajenovic; Heinz Ruffner; Alejandro Merino; Karin Klein; Manuela Hudak; David Dickson; Tatjana Rudi; Volker Gnau; Angela Bauch; Sonja Bastuck; Bettina Huhse; Christina Leutwein; Marie-Anne Heurtier; Richard R Copley; Angela Edelmann; Erich Querfurth; Vladimir Rybin; Gerard Drewes; Manfred Raida; Tewis Bouwmeester; Peer Bork; Bertrand Seraphin; Bernhard Kuster; Gitte Neubauer; Giulio Superti-Furga
Journal:  Nature       Date:  2002-01-10       Impact factor: 49.962

6.  A genetic system based on split-ubiquitin for the analysis of interactions between membrane proteins in vivo.

Authors:  I Stagljar; C Korostensky; N Johnsson; S te Heesen
Journal:  Proc Natl Acad Sci U S A       Date:  1998-04-28       Impact factor: 11.205

7.  A proteome analysis of the cadmium response in Saccharomyces cerevisiae.

Authors:  K Vido; D Spector; G Lagniel; S Lopez; M B Toledano; J Labarre
Journal:  J Biol Chem       Date:  2000-11-14       Impact factor: 5.157

8.  Evaluation of two-dimensional difference gel electrophoresis for protein profiling. Soluble proteins of the marine bacterium Pirellula sp. strain 1.

Authors:  Dörte Gade; Jürgen Thiermann; Dieter Markowsky; Ralf Rabus
Journal:  J Mol Microbiol Biotechnol       Date:  2003

9.  Dosage sensitivity and the evolution of gene families in yeast.

Authors:  Balázs Papp; Csaba Pál; Laurence D Hurst
Journal:  Nature       Date:  2003-07-10       Impact factor: 49.962

10.  2D differential in-gel electrophoresis for the identification of esophageal scans cell cancer-specific protein markers.

Authors:  Ge Zhou; Hongmei Li; Dianne DeCamp; She Chen; Hongjun Shu; Yi Gong; Michael Flaig; John W Gillespie; Nan Hu; Philip R Taylor; Michael R Emmert-Buck; Lance A Liotta; Emanuel F Petricoin; Yingming Zhao
Journal:  Mol Cell Proteomics       Date:  2002-02       Impact factor: 5.911

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  4 in total

Review 1.  Application of microarrays in high-throughput enzymatic profiling.

Authors:  Mahesh Uttamchandani; Xuan Huang; Grace Y J Chen; Lay-Pheng Tan; Shao Q Yao
Journal:  Mol Biotechnol       Date:  2004-11       Impact factor: 2.695

Review 2.  Proteomics of the human placenta: promises and realities.

Authors:  J M Robinson; W E Ackerman; D A Kniss; T Takizawa; D D Vandré
Journal:  Placenta       Date:  2008-01-28       Impact factor: 3.481

Review 3.  Application and implementation of selective tissue microdissection and proteomic profiling in neurological disease.

Authors:  Jay Jagannathan; Jie Li; Nicholas Szerlip; Alexander O Vortmeyer; Russell R Lonser; Edward H Oldfield; Zhengping Zhuang
Journal:  Neurosurgery       Date:  2009-01       Impact factor: 4.654

4.  Metabolic labeling with noncanonical amino acids and visualization by chemoselective fluorescent tagging.

Authors:  Susanne Tom Dieck; Anke Müller; Anne Nehring; Flora I Hinz; Ina Bartnik; Erin M Schuman; Daniela C Dieterich
Journal:  Curr Protoc Cell Biol       Date:  2012-09
  4 in total

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