Literature DB >> 15451108

Evaluation of the robustness of FT-IR spectra of lactobacilli towards changes in the bacterial growth conditions.

Astrid Oust1, Trond Møretrø, Carolin Kirschner, Judith A Narvhus, Achim Kohler.   

Abstract

In order to use Fourier Transform Infrared (FT-IR) spectroscopy for identification of microorganisms on a routine basis, it is important that the spectra are robust against small, uncontrollable variations in the bacterial growth conditions. In this study, the effect of small variations in growth temperature, growth time, growth medium and atmospheric conditions on the separation of Lactobacillus based on their FT-IR spectra was investigated. The resulting spectra were shown to be robust against the variations in the cultivation conditions, and the separation of both strains and species was unaffected. Larger variations in the growth medium influenced only the separation of strains. FT-IR spectroscopy for identification of lactobacilli therefore seems to be robust against small variations in the cultivation conditions.

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Year:  2004        PMID: 15451108     DOI: 10.1016/j.femsle.2004.08.024

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN: 0378-1097            Impact factor:   2.742


  6 in total

1.  Discrimination of enterobacterial repetitive intergenic consensus PCR types of Campylobacter coli and Campylobacter jejuni by Fourier transform infrared spectroscopy.

Authors:  D J M Mouwen; M J B M Weijtens; R Capita; C Alonso-Calleja; M Prieto
Journal:  Appl Environ Microbiol       Date:  2005-08       Impact factor: 4.792

2.  High-throughput biochemical fingerprinting of Saccharomyces cerevisiae by Fourier transform infrared spectroscopy.

Authors:  Achim Kohler; Ulrike Böcker; Volha Shapaval; Annabelle Forsmark; Mats Andersson; Jonas Warringer; Harald Martens; Stig W Omholt; Anders Blomberg
Journal:  PLoS One       Date:  2015-02-23       Impact factor: 3.240

3.  Merging FT-IR and NGS for simultaneous phenotypic and genotypic identification of pathogenic Candida species.

Authors:  Claudia Colabella; Laura Corte; Luca Roscini; Volha Shapaval; Achim Kohler; Valeria Tafintseva; Carlo Tascini; Gianluigi Cardinali
Journal:  PLoS One       Date:  2017-12-04       Impact factor: 3.240

4.  Vibrational Spectroscopy as a Sensitive Probe for the Chemistry of Intra-Phase Bacterial Growth.

Authors:  Kamila Kochan; Elizabeth Lai; Zack Richardson; Cara Nethercott; Anton Y Peleg; Philip Heraud; Bayden R Wood
Journal:  Sensors (Basel)       Date:  2020-06-18       Impact factor: 3.576

5.  Evaluation of IR Biotyper for Lactiplantibacillus plantarum Typing and Its Application Potential in Probiotic Preliminary Screening.

Authors:  Xiaoqiong Li; Liying Zhu; Xin Wang; Jinjun Li; Biao Tang
Journal:  Front Microbiol       Date:  2022-03-24       Impact factor: 5.640

6.  Fourier transform infrared spectroscopy for the prediction of fatty acid profiles in Mucor fungi grown in media with different carbon sources.

Authors:  Volha Shapaval; Nils Kristian Afseth; Gjermund Vogt; Achim Kohler
Journal:  Microb Cell Fact       Date:  2014-09-11       Impact factor: 5.328

  6 in total

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