Literature DB >> 15388916

Machine-learning techniques for macromolecular crystallization data.

Vanathi Gopalakrishnan1, Gary Livingston, Daniel Hennessy, Bruce Buchanan, John M Rosenberg.   

Abstract

Systematizing belief systems regarding macromolecular crystallization has two major advantages: automation and clarification. In this paper, methodologies are presented for systematizing and representing knowledge about the chemical and physical properties of additives used in crystallization experiments. A novel autonomous discovery program is introduced as a method to prune rule-based models produced from crystallization data augmented with such knowledge. Computational experiments indicate that such a system can retain and present informative rules pertaining to protein crystallization that warrant further confirmation via experimental techniques.

Mesh:

Substances:

Year:  2004        PMID: 15388916     DOI: 10.1107/S090744490401683X

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  4 in total

1.  Automatic classification and pattern discovery in high-throughput protein crystallization trials.

Authors:  Christian Cumbaa; Igor Jurisica
Journal:  J Struct Funct Genomics       Date:  2005

2.  A multiplexed serum biomarker immunoassay panel discriminates clinical lung cancer patients from high-risk individuals found to be cancer-free by CT screening.

Authors:  William L Bigbee; Vanathi Gopalakrishnan; Joel L Weissfeld; David O Wilson; Sanja Dacic; Anna E Lokshin; Jill M Siegfried
Journal:  J Thorac Oncol       Date:  2012-04       Impact factor: 15.609

3.  Transfer learning of classification rules for biomarker discovery and verification from molecular profiling studies.

Authors:  Philip Ganchev; David Malehorn; William L Bigbee; Vanathi Gopalakrishnan
Journal:  J Biomed Inform       Date:  2011-05-06       Impact factor: 6.317

4.  Knowledge-based variable selection for learning rules from proteomic data.

Authors:  Jonathan L Lustgarten; Shyam Visweswaran; Robert P Bowser; William R Hogan; Vanathi Gopalakrishnan
Journal:  BMC Bioinformatics       Date:  2009-09-17       Impact factor: 3.169

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.