Literature DB >> 15388727

Classification of the biphenyl- and polychlorinated biphenyl-degrading strain LB400T and relatives as Burkholderia xenovorans sp. nov.

Johan Goris1, Paul De Vos1, Jesús Caballero-Mellado2, Joonhong Park3, Enevold Falsen4, John F Quensen3, James M Tiedje3, Peter Vandamme1.   

Abstract

Strain LB400T is the best-studied polychlorinated biphenyl (PCB) degrader. This organism has previously been allocated in the genus Burkholderia, since its 16S rRNA gene sequence shows 98.6 % sequence similarity to the type strains of Burkholderia graminis and Burkholderia terricola. A polyphasic study was undertaken to clarify the actual taxonomic position of this biotechnologically important organism and of two strains, one recovered from a blood culture vial and one from a coffee plant rhizosphere, both of which resembled strain LB400T in their whole-cell protein patterns. DNA-DNA hybridization experiments revealed that the three strains represented a single novel species, for which the name Burkholderia xenovorans sp. nov. is proposed. Strains of this novel species can be differentiated phenotypically from nearly all other Burkholderia species by their inability to assimilate L-arabinose. The whole-cell fatty acid profile of B. xenovorans strains is consistent with their classification in the genus Burkholderia, with 18 : 1omega7c, 16 : 1omega7c, 16 : 0, 14 : 0 3OH, 16 : 0 3OH, 17 : 0 cyclo and 14 : 0 being the most abundant fatty acids. The G + C content of the species varies between 62.4 and 62.9 mol%. The type strain of B. xenovorans is LB400T (= LMG 21463T = CCUG 46959T = NRRL B-18064T).

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Year:  2004        PMID: 15388727     DOI: 10.1099/ijs.0.63101-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  49 in total

1.  Biphenyl and benzoate metabolism in a genomic context: outlining genome-wide metabolic networks in Burkholderia xenovorans LB400.

Authors:  V J Denef; J Park; T V Tsoi; J-M Rouillard; H Zhang; J A Wibbenmeyer; W Verstraete; E Gulari; S A Hashsham; J M Tiedje
Journal:  Appl Environ Microbiol       Date:  2004-08       Impact factor: 4.792

2.  Production of polyhydroxyalkanoates by Burkholderia cepacia ATCC 17759 using a detoxified sugar maple hemicellulosic hydrolysate.

Authors:  Wenyang Pan; Joseph A Perrotta; Arthur J Stipanovic; Christopher T Nomura; James P Nakas
Journal:  J Ind Microbiol Biotechnol       Date:  2011-09-28       Impact factor: 3.346

3.  Structural Insights into Anthranilate Priming during Type II Polyketide Biosynthesis.

Authors:  David R Jackson; Stephanie S Tu; MyChi Nguyen; Jesus F Barajas; Andrew J Schaub; Daniel Krug; Dominik Pistorius; Ray Luo; Rolf Müller; Shiou-Chuan Tsai
Journal:  ACS Chem Biol       Date:  2015-11-03       Impact factor: 5.100

4.  Genetic and genomic insights into the role of benzoate-catabolic pathway redundancy in Burkholderia xenovorans LB400.

Authors:  V J Denef; J A Klappenbach; M A Patrauchan; C Florizone; J L M Rodrigues; T V Tsoi; W Verstraete; L D Eltis; J M Tiedje
Journal:  Appl Environ Microbiol       Date:  2006-01       Impact factor: 4.792

5.  Assessment of toluene/biphenyl dioxygenase gene diversity in benzene-polluted soils: links between benzene biodegradation and genes similar to those encoding isopropylbenzene dioxygenases.

Authors:  Robert Witzig; Howard Junca; Hans-Jürgen Hecht; Dietmar H Pieper
Journal:  Appl Environ Microbiol       Date:  2006-05       Impact factor: 4.792

6.  Functional analysis of unique class II insertion sequence IS1071.

Authors:  Masahiro Sota; Hirokazu Yano; Yuji Nagata; Yoshiyuki Ohtsubo; Hiroyuki Genka; Hisashi Anbutsu; Haruhiko Kawasaki; Masataka Tsuda
Journal:  Appl Environ Microbiol       Date:  2006-01       Impact factor: 4.792

7.  Multichromosomal genome structure and confirmation of diazotrophy in novel plant-associated Burkholderia species.

Authors:  Lourdes Martínez-Aguilar; Rafael Díaz; Juan José Peña-Cabriales; Paulina Estrada-de Los Santos; Michael F Dunn; Jesús Caballero-Mellado
Journal:  Appl Environ Microbiol       Date:  2008-05-23       Impact factor: 4.792

8.  Species abundance and diversity of Burkholderia cepacia complex in the environment.

Authors:  Alban Ramette; John J LiPuma; James M Tiedje
Journal:  Appl Environ Microbiol       Date:  2005-03       Impact factor: 4.792

9.  Aerobic benzoyl-coenzyme A (CoA) catabolic pathway in Azoarcus evansii: conversion of ring cleavage product by 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase.

Authors:  Johannes Gescher; Wael Ismail; Ellen Olgeschläger; Wolfgang Eisenreich; Jürgen Wörth; Georg Fuchs
Journal:  J Bacteriol       Date:  2006-04       Impact factor: 3.490

10.  Distinct roles for two CYP226 family cytochromes P450 in abietane diterpenoid catabolism by Burkholderia xenovorans LB400.

Authors:  Daryl J Smith; Marianna A Patrauchan; Christine Florizone; Lindsay D Eltis; William W Mohn
Journal:  J Bacteriol       Date:  2007-12-21       Impact factor: 3.490

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