Literature DB >> 15384411

High density peptide microarrays. In situ synthesis and applications.

Xiaolian Gao1, Jean Philippe Pellois, Younghwa Na, Younkee Kim, Erdogan Gulari, Xiaochuan Zhou.   

Abstract

The technologies enabling the creation of large scale, miniaturized peptide or protein microarrays are emerging. The focuses of this review are the synthesis and applications of peptide and peptidomimetic microarrays, especially the light directed parallel synthesis of individually addressable high density peptide microarrays using a novel photogenerated reagent chemistry and digital photolithography (Gao et al., 1998, J. Am. Chem. Soc. 120, 12698; Pellois et al. 2002, Nat. Biotechnol. 20, 922). Concepts related to the synthesis are discussed, such as the reactions of photogenerated acids in the deprotection step of peptide synthesis or oligonucleotide synthesis, and the applications of high density peptide chips in antibody binding assays are discussed. Peptide chips provide versatile tools for probing antigen-antibody, protein-protein, peptide-ligand interactions and are basic components for miniaturization, automation, and system integration in research and clinical diagnosis applications.

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Year:  2004        PMID: 15384411     DOI: 10.1023/b:modi.0000036233.58271.25

Source DB:  PubMed          Journal:  Mol Divers        ISSN: 1381-1991            Impact factor:   2.943


  58 in total

1.  Solid-phase combinatorial synthesis using MicroKan reactors, Rf tagging, and directed sorting.

Authors:  X Y Xiao; R Li; H Zhuang; B Ewing; K Karunaratne; J Lillig; R Brown; K C Nicolaou
Journal:  Biotechnol Bioeng       Date:  2000       Impact factor: 4.530

Review 2.  Protein microarray technology.

Authors:  Markus F Templin; Dieter Stoll; Monika Schrenk; Petra C Traub; Christian F Vöhringer; Thomas O Joos
Journal:  Trends Biotechnol       Date:  2002-04       Impact factor: 19.536

3.  Individually addressable parallel peptide synthesis on microchips.

Authors:  Jean Philippe Pellois; Xiaochuan Zhou; Onnop Srivannavit; Tiecheng Zhou; Erdogan Gulari; Xiaolian Gao
Journal:  Nat Biotechnol       Date:  2002-07-22       Impact factor: 54.908

Review 4.  Protein expression systems for structural genomics and proteomics.

Authors:  Shigeyuki Yokoyama
Journal:  Curr Opin Chem Biol       Date:  2003-02       Impact factor: 8.822

5.  The evolution of custom microarray manufacture.

Authors:  Harold R Garner; Robert P Balog; Kevin J Luebke
Journal:  IEEE Eng Med Biol Mag       Date:  2002 Jul-Aug

6.  A new type of synthetic peptide library for identifying ligand-binding activity.

Authors:  K S Lam; S E Salmon; E M Hersh; V J Hruby; W M Kazmierski; R J Knapp
Journal:  Nature       Date:  1991-11-07       Impact factor: 49.962

7.  A flexible light-directed DNA chip synthesis gated by deprotection using solution photogenerated acids.

Authors:  X Gao; E LeProust; H Zhang; O Srivannavit; E Gulari; P Yu; C Nishiguchi; Q Xiang; X Zhou
Journal:  Nucleic Acids Res       Date:  2001-11-15       Impact factor: 16.971

8.  Proteome-scale purification of human proteins from bacteria.

Authors:  Pascal Braun; Yanhui Hu; Binghua Shen; Allison Halleck; Malvika Koundinya; Ed Harlow; Joshua LaBaer
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-05       Impact factor: 11.205

9.  An unnatural biopolymer.

Authors:  C Y Cho; E J Moran; S R Cherry; J C Stephans; S P Fodor; C L Adams; A Sundaram; J W Jacobs; P G Schultz
Journal:  Science       Date:  1993-09-03       Impact factor: 47.728

10.  Mapping of synergistic components of weakly interacting protein-protein motifs using arrays of paired peptides.

Authors:  Xavier Espanel; Sébastien Wälchli; Thomas Rückle; Axel Harrenga; Martine Huguenin-Reggiani; Rob Hooft van Huijsduijnen
Journal:  J Biol Chem       Date:  2003-01-27       Impact factor: 5.157

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  9 in total

1.  Exploring antibody recognition of sequence space through random-sequence peptide microarrays.

Authors:  Rebecca F Halperin; Phillip Stafford; Stephen Albert Johnston
Journal:  Mol Cell Proteomics       Date:  2010-11-09       Impact factor: 5.911

2.  Memory enhancement by targeting Cdk5 regulation of NR2B.

Authors:  Florian Plattner; Adan Hernández; Tara M Kistler; Karine Pozo; Ping Zhong; Eunice Y Yuen; Chunfeng Tan; Ammar H Hawasli; Sam F Cooke; Akinori Nishi; Ailan Guo; Thorsten Wiederhold; Zhen Yan; James A Bibb
Journal:  Neuron       Date:  2014-03-05       Impact factor: 17.173

3.  A Novel Phosphopeptide Microarray Based Interactome Map in Breast Cancer Cells Reveals Phosphoprotein-GRB2 Cell Signaling Networks.

Authors:  Srinivasan Krishnamoorthy; Zhonghua Liu; Ailing Hong; Ruijuan Zhu; Haosi Chen; Tongbin Li; Xiaochuan Zhou; Xiaolian Gao
Journal:  PLoS One       Date:  2013-06-27       Impact factor: 3.240

4.  A platform for combined DNA and protein microarrays based on total internal reflection fluorescence.

Authors:  Alexander Asanov; Angélica Zepeda; Luis Vaca
Journal:  Sensors (Basel)       Date:  2012-02-09       Impact factor: 3.576

5.  A General Method to Discover Epitopes from Sera.

Authors:  Kurt Whittemore; Stephen Albert Johnston; Kathryn Sykes; Luhui Shen
Journal:  PLoS One       Date:  2016-06-14       Impact factor: 3.240

6.  High-throughput immuno-profiling of mamba (Dendroaspis) venom toxin epitopes using high-density peptide microarrays.

Authors:  Mikael Engmark; Mikael R Andersen; Andreas H Laustsen; Jigar Patel; Eric Sullivan; Federico de Masi; Christian S Hansen; Jens V Kringelum; Bruno Lomonte; José María Gutiérrez; Ole Lund
Journal:  Sci Rep       Date:  2016-11-08       Impact factor: 4.379

7.  Entropy is a Simple Measure of the Antibody Profile and is an Indicator of Health Status: A Proof of Concept.

Authors:  Lu Wang; Kurt Whittemore; Stephen Albert Johnston; Phillip Stafford
Journal:  Sci Rep       Date:  2017-12-22       Impact factor: 4.379

Review 8.  Antibody Cross-Reactivity in Antivenom Research.

Authors:  Line Ledsgaard; Timothy P Jenkins; Kristian Davidsen; Kamille Elvstrøm Krause; Andrea Martos-Esteban; Mikael Engmark; Mikael Rørdam Andersen; Ole Lund; Andreas Hougaard Laustsen
Journal:  Toxins (Basel)       Date:  2018-09-27       Impact factor: 4.546

9.  Rapid identification of ubiquitination and SUMOylation target sites by microfluidic peptide array.

Authors:  Bing Zhu; Tierra R Farris; Sarah L Milligan; Haosi Chen; Ruijuan Zhu; Aailing Hong; Xiaochuan Zhou; Xiaolian Gao; Jere W McBride
Journal:  Biochem Biophys Rep       Date:  2016-03-01
  9 in total

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