Literature DB >> 15381396

Perspectives in anti-infective drug design. The late steps in the biosynthesis of the universal terpenoid precursors, isopentenyl diphosphate and dimethylallyl diphosphate.

Felix Rohdich1, Adelbert Bacher, Wolfgang Eisenreich.   

Abstract

A mevalonate-independent pathway for the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) that has been elucidated during the last decade is essential in plants, many eubacteria and apicomplexan parasites, but is absent in Archaea and animals. The enzymes of the pathway are potential targets for the development of novel antibiotic, antimalarial and herbicidal agents. This review is focused on the late steps of this pathway. The intermediate 2C-methyl-D-erythritol 2,4-cyclodiphosphate is converted into IPP and DMAPP via 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate by the consecutive action of the iron-sulfur proteins IspG and IspH. IPP and DMAPP can be interconverted by IPP isomerase which is essential in microorganisms using the mevalonate pathway, whereas its presence is optional in microorganisms using the non-mevalonate pathway. A hitherto unknown family of IPP isomerases using FMN as coenzyme has been discovered recently in Archaea and certain eubacteria.

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Year:  2004        PMID: 15381396     DOI: 10.1016/j.bioorg.2004.05.012

Source DB:  PubMed          Journal:  Bioorg Chem        ISSN: 0045-2068            Impact factor:   5.275


  21 in total

Review 1.  Targeting Metalloenzymes for Therapeutic Intervention.

Authors:  Allie Y Chen; Rebecca N Adamek; Benjamin L Dick; Cy V Credille; Christine N Morrison; Seth M Cohen
Journal:  Chem Rev       Date:  2018-09-07       Impact factor: 60.622

2.  Reductive evolution and niche adaptation inferred from the genome of Mycobacterium ulcerans, the causative agent of Buruli ulcer.

Authors:  Timothy P Stinear; Torsten Seemann; Sacha Pidot; Wafa Frigui; Gilles Reysset; Thierry Garnier; Guillaume Meurice; David Simon; Christiane Bouchier; Laurence Ma; Magali Tichit; Jessica L Porter; Janine Ryan; Paul D R Johnson; John K Davies; Grant A Jenkin; Pamela L C Small; Louis M Jones; Fredj Tekaia; Françoise Laval; Mamadou Daffé; Julian Parkhill; Stewart T Cole
Journal:  Genome Res       Date:  2007-01-08       Impact factor: 9.043

Review 3.  Lipid sugar carriers at the extremes: The phosphodolichols Archaea use in N-glycosylation.

Authors:  Jerry Eichler; Ziqiang Guan
Journal:  Biochim Biophys Acta Mol Cell Biol Lipids       Date:  2017-03-19       Impact factor: 4.698

4.  Isopentenyl diphosphate isomerase. Mechanism-based inhibition by diene analogues of isopentenyl diphosphate and dimethylallyl diphosphate.

Authors:  Zheng Wu; Johan Wouters; C Dale Poulter
Journal:  J Am Chem Soc       Date:  2005-12-14       Impact factor: 15.419

5.  Crystal structure of the Streptococcus pneumoniae mevalonate kinase in complex with diphosphomevalonate.

Authors:  John L Andreassi; Patrick W Bilder; Matthew W Vetting; Steven L Roderick; Thomas S Leyh
Journal:  Protein Sci       Date:  2007-03-30       Impact factor: 6.725

6.  Identification and characterization of differentially expressed genes involved in pharmacological activities of roots of Panax notoginseng during plant growth.

Authors:  Fengmei He; Yongping Zhu; Yizheng Zhang
Journal:  Plant Cell Rep       Date:  2008-02-19       Impact factor: 4.570

7.  Crystal structure of type 2 isopentenyl diphosphate isomerase from Thermus thermophilus in complex with inorganic pyrophosphate.

Authors:  Jérôme de Ruyck; Jenny Pouyez; Steven C Rothman; Dale Poulter; Johan Wouters
Journal:  Biochemistry       Date:  2008-08-12       Impact factor: 3.162

Review 8.  The biochemical basis for structural diversity in the carotenoids of chlorophototrophic bacteria.

Authors:  Julia A Maresca; Joel E Graham; Donald A Bryant
Journal:  Photosynth Res       Date:  2008-06-06       Impact factor: 3.573

9.  Insights from the complete genome sequence of Mycobacterium marinum on the evolution of Mycobacterium tuberculosis.

Authors:  Timothy P Stinear; Torsten Seemann; Paul F Harrison; Grant A Jenkin; John K Davies; Paul D R Johnson; Zahra Abdellah; Claire Arrowsmith; Tracey Chillingworth; Carol Churcher; Kay Clarke; Ann Cronin; Paul Davis; Ian Goodhead; Nancy Holroyd; Kay Jagels; Angela Lord; Sharon Moule; Karen Mungall; Halina Norbertczak; Michael A Quail; Ester Rabbinowitsch; Danielle Walker; Brian White; Sally Whitehead; Pamela L C Small; Roland Brosch; Lalita Ramakrishnan; Michael A Fischbach; Julian Parkhill; Stewart T Cole
Journal:  Genome Res       Date:  2008-04-10       Impact factor: 9.043

Review 10.  Structure and synthesis of polyisoprenoids used in N-glycosylation across the three domains of life.

Authors:  Meredith B Jones; Julian N Rosenberg; Michael J Betenbaugh; Sharon S Krag
Journal:  Biochim Biophys Acta       Date:  2009-04-05
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