Literature DB >> 15381077

Self-polymerization of archaeal RadA protein into long and fine helical filaments.

Ming-Hui Lee1, Chih-Hsiang Leng, Yuan-Chih Chang, Chia-Cheng Chou, Yi-Kai Chen, Fu-Fei Hsu, Chia-Seng Chang, Andrew H-J Wang, Ting-Fang Wang.   

Abstract

The Archaeal protein RadA, a RecA/Rad51 homolog, is able to promote pairing and exchange of DNA strands with homologous sequences. Here, we have expressed, purified, and crystallized the catalytically active RadA protein from Sulfolobus solfataricus (Sso). Preliminary X-ray analysis indicated that Sso RadA protein likely forms helical filament in protein crystals. Using atomic force microscopy with a carbon nanotube (CNT) tip for high-resolution imaging, we demonstrated that Sso RadA protein indeed forms fine helical filaments up to 1 microm in length ( approximately 10nm pitch) in the absence of DNA and nucleotide cofactor. We also observed that Sso RadA protein helical filament could dissemble upon incubation with ssDNA, and then the proteins associate with ssDNA to form nucleoprotein filament.

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Year:  2004        PMID: 15381077     DOI: 10.1016/j.bbrc.2004.08.163

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  9 in total

1.  An improved SUMO fusion protein system for effective production of native proteins.

Authors:  Chien-Der Lee; Hui-Chien Sun; Su-Ming Hu; Ching-Feng Chiu; Atthachai Homhuan; Shu-Mei Liang; Chih-Hsiang Leng; Ting-Fang Wang
Journal:  Protein Sci       Date:  2008-05-08       Impact factor: 6.725

2.  A recombinase paralog from the hyperthermophilic crenarchaeon Sulfolobus solfataricus enhances SsoRadA ssDNA binding and strand displacement.

Authors:  William J Graham; Cynthia A Haseltine
Journal:  Gene       Date:  2012-12-06       Impact factor: 3.688

3.  The in vitro activity of a Rad55 homologue from Sulfolobus tokodaii, a candidate mediator in RadA-catalyzed homologous recombination.

Authors:  Duohong Sheng; Shanshan Zhu; Tao Wei; Jinfeng Ni; Yulong Shen
Journal:  Extremophiles       Date:  2007-10-17       Impact factor: 2.395

4.  Crystal structure of the left-handed archaeal RadA helical filament: identification of a functional motif for controlling quaternary structures and enzymatic functions of RecA family proteins.

Authors:  Li-Tzu Chen; Tzu-Ping Ko; Yuan-Chih Chang; Kuei-An Lin; Chia-Seng Chang; Andrew H-J Wang; Ting-Fang Wang
Journal:  Nucleic Acids Res       Date:  2007-02-28       Impact factor: 16.971

5.  Three new structures of left-handed RADA helical filaments: structural flexibility of N-terminal domain is critical for recombinase activity.

Authors:  Yu-Wei Chang; Tzu-Ping Ko; Chien-Der Lee; Yuan-Chih Chang; Kuei-Ann Lin; Chia-Seng Chang; Andrew H-J Wang; Ting-Fang Wang
Journal:  PLoS One       Date:  2009-03-19       Impact factor: 3.240

6.  Target molecular simulations of RecA family protein filaments.

Authors:  Zhi-Yuan Su; Wen-Jay Lee; Wan-Sheng Su; Yeng-Tseng Wang
Journal:  Int J Mol Sci       Date:  2012-06-11       Impact factor: 6.208

7.  Structural and functional analyses of five conserved positively charged residues in the L1 and N-terminal DNA binding motifs of archaeal RADA protein.

Authors:  Li-Tzu Chen; Tzu-Ping Ko; Yu-Wei Chang; Kuei-An Lin; Andrew H-J Wang; Ting-Fang Wang
Journal:  PLoS One       Date:  2007-09-12       Impact factor: 3.240

8.  Conformational flexibility revealed by the crystal structure of a crenarchaeal RadA.

Authors:  Antonio Ariza; Derek J Richard; Malcolm F White; Charles S Bond
Journal:  Nucleic Acids Res       Date:  2005-03-08       Impact factor: 16.971

9.  A comparative analysis of Dmc1 and Rad51 nucleoprotein filaments.

Authors:  Sean D Sheridan; Xiong Yu; Robyn Roth; John E Heuser; Michael G Sehorn; Patrick Sung; Edward H Egelman; Douglas K Bishop
Journal:  Nucleic Acids Res       Date:  2008-06-04       Impact factor: 16.971

  9 in total

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