Literature DB >> 15379645

Virtual screening in structure-based drug discovery.

X Barril1, R E Hubbard, S D Morley.   

Abstract

Recent advances in structure determination and computational methods have encouraged the development of structure-based virtual screening. Here we survey progress in the field and review the most recent methods, validation experiments and real applications, including an in-house example of hit identification for the oncology target Hsp90. These results provide a basis for discussing the current state of structure-based virtual screening and to outline the developments that are expected to have a major impact in the near future.

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Year:  2004        PMID: 15379645     DOI: 10.2174/1389557043403675

Source DB:  PubMed          Journal:  Mini Rev Med Chem        ISSN: 1389-5575            Impact factor:   3.862


  14 in total

1.  Optimization of CAMD techniques 3. Virtual screening enrichment studies: a help or hindrance in tool selection?

Authors:  Andrew C Good; Tudor I Oprea
Journal:  J Comput Aided Mol Des       Date:  2008-01-09       Impact factor: 3.686

Review 2.  The impact of GPCR structures on pharmacology and structure-based drug design.

Authors:  Miles Congreve; Fiona Marshall
Journal:  Br J Pharmacol       Date:  2009-11-13       Impact factor: 8.739

3.  Inhibition of protein-protein interactions with low molecular weight compounds.

Authors:  Marilyn M Matthews; David J Weber; Paul S Shapiro; Andrew Coop; Alexander D Mackerell
Journal:  Curr Trends Med Chem       Date:  2008-01-01

4.  Docking-undocking combination applied to the D3R Grand Challenge 2015.

Authors:  Sergio Ruiz-Carmona; Xavier Barril
Journal:  J Comput Aided Mol Des       Date:  2016-10-05       Impact factor: 3.686

5.  Exploring the size limit of templates for inhibitors of the M2 ion channel of influenza A virus.

Authors:  María D Duque; Chunlong Ma; Eva Torres; Jun Wang; Lieve Naesens; Jordi Juárez-Jiménez; Pelayo Camps; F Javier Luque; William F DeGrado; Robert A Lamb; Lawrence H Pinto; Santiago Vázquez
Journal:  J Med Chem       Date:  2011-04-05       Impact factor: 7.446

Review 6.  Quantum mechanics implementation in drug-design workflows: does it really help?

Authors:  Olayide A Arodola; Mahmoud Es Soliman
Journal:  Drug Des Devel Ther       Date:  2017-08-31       Impact factor: 4.162

7.  In Silico Study and Bioprospection of the Antibacterial and Antioxidant Effects of Flavone and Its Hydroxylated Derivatives.

Authors:  Camila de Albuquerque Montenegro; Gregório Fernandes Gonçalves; Abrahão Alves de Oliveira Filho; Andressa Brito Lira; Thays Thyara Mendes Cassiano; Natanael Teles Ramos de Lima; José Maria Barbosa-Filho; Margareth de Fátima Formiga Melo Diniz; Hilzeth Luna Freire Pessôa
Journal:  Molecules       Date:  2017-05-24       Impact factor: 4.411

8.  Synthesis, structural analysis, and biological evaluation of thioxoquinazoline derivatives as phosphodiesterase 7 inhibitors.

Authors:  Tania Castaño; Huanchen Wang; Nuria E Campillo; Sara Ballester; Coral González-García; Javier Hernández; Concepción Pérez; Jimena Cuenca; Ana Pérez-Castillo; Ana Martínez; Oscar Huertas; José Luis Gelpí; F Javier Luque; Hengming Ke; Carmen Gil
Journal:  ChemMedChem       Date:  2009-05       Impact factor: 3.466

9.  rDock: a fast, versatile and open source program for docking ligands to proteins and nucleic acids.

Authors:  Sergio Ruiz-Carmona; Daniel Alvarez-Garcia; Nicolas Foloppe; A Beatriz Garmendia-Doval; Szilveszter Juhos; Peter Schmidtke; Xavier Barril; Roderick E Hubbard; S David Morley
Journal:  PLoS Comput Biol       Date:  2014-04-10       Impact factor: 4.475

Review 10.  Targeting the C-Terminal Domain Small Phosphatase 1.

Authors:  Harikrishna Reddy Rallabandi; Palanivel Ganesan; Young Jun Kim
Journal:  Life (Basel)       Date:  2020-05-08
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