Literature DB >> 15376505

Using prior knowledge in SVD-based parameter estimation for magnetic resonance spectroscopy--the ATP example.

Petre Stoica1, Yngve Selén, Niclas Sandgren, Sabine Van Huffel.   

Abstract

We introduce the knowledge-based singular value decomposition (KNOB-SVD) method for exploiting prior knowledge in magnetic resonance (MR) spectroscopy based on the SVD of the data matrix. More specifically, we assume that the MR data are well modeled by the superposition of a given number of exponentially damped sinusoidal components and that the dampings alphakappa, frequencies omegakappa, and complex amplitudes rhokappa of some components satisfy the following relations: alphakappa = alpha (alpha = unknown), omegakappa = omega + (kappa- 1)delta (omega = unknown, delta = known), and rhokappa = Ckapparho (rho = unknown, ckappa = known real constants). The adenosine triphosphate (ATP) complex, which has one triple peak and two double peaks whose dampings, frequencies, and amplitudes may in some cases be known to satisfy the above type of relations, is used as a vehicle for describing our SVD-based method throughout the paper. By means of numerical examples, we show that our method provides more accurate parameter estimates than a commonly used general-purpose SVD-based method and a previously suggested prior knowledge-based SVD method.

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Year:  2004        PMID: 15376505     DOI: 10.1109/TBME.2004.828031

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.538


  4 in total

1.  NMR-derived models of amidopyrine and its metabolites in complexes with rabbit cytochrome P450 2B4 reveal a structural mechanism of sequential N-dealkylation.

Authors:  Arthur G Roberts; Sara E A Sjögren; Nadezda Fomina; Kathy T Vu; Adah Almutairi; James R Halpert
Journal:  Biochemistry       Date:  2011-03-04       Impact factor: 3.162

2.  Spectral Quantification for High-Resolution MR Spectroscopic Imaging With Spatiospectral Constraints.

Authors:  Qiang Ning; Chao Ma; Fan Lam; Zhi-Pei Liang
Journal:  IEEE Trans Biomed Eng       Date:  2016-07-27       Impact factor: 4.538

3.  The structural basis for homotropic and heterotropic cooperativity of midazolam metabolism by human cytochrome P450 3A4.

Authors:  Arthur G Roberts; Jing Yang; James R Halpert; Sidney D Nelson; Kenneth T Thummel; William M Atkins
Journal:  Biochemistry       Date:  2011-11-22       Impact factor: 3.162

4.  Response to Comments on "Magnetic Resonance Spectroscopy Identifies Neural Progenitor Cells in the Live Human Brain".

Authors:  Petar M Djurić; Helena Benveniste; Mark E Wagshul; Fritz Henn; Grigori Enikolopov; Mirjana Maletić-Savatić
Journal:  Science       Date:  2008-08-01       Impact factor: 47.728

  4 in total

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