Literature DB >> 15373839

Critical roles of Asp40 at the haem proximal side of haem-regulated phosphodiesterase from Escherichia coli in redox potential, auto-oxidation and catalytic control.

Miki Watanabe1, Hirofumi Kurokawa, Tokiko Yoshimura-Suzuki, Ikuko Sagami, Toru Shimizu.   

Abstract

In haem-regulated phosphodiesterase (PDE) from Escherichia coli (Ec DOS), haem is bound to the PAS domain, and the redox state of the haem iron regulates catalysis by the PDE domain. We generated mutants of Asp40, which forms a hydrogen bond with His77 (a proximal haem axial ligand) via two water molecules, and a salt bridge with Arg85 at the protein surface. The redox potential of haem was markedly increased from 67 mV vs. the standard hydrogen electrode in the wild-type enzyme to 95 mV and 114 mV in the Ala and Asn mutants, respectively. Additionally, the auto-oxidation rate of Ec DOS PAS was significantly increased from 0.0053 to 0.051 and 0.033 min(-1), respectively. Interestingly, the catalytic activities of the Asp40 mutants were abolished completely. Thus, Asp40 appears to play a critical role in the electronic structure of the haem iron and redox-dependent catalytic control of the PDE domain. In this report, we discuss the mechanism of catalytic control of Ec DOS, based on the physico-chemical characteristics of the Asp40 mutants.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15373839     DOI: 10.1111/j.1432-1033.2004.04331.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  2 in total

1.  pH dependence of cyanide binding to the ferric heme domain of the direct oxygen sensor from Escherichia coli and the effect of alkaline denaturation.

Authors:  Anil K Bidwai; Esther Y Ok; James E Erman
Journal:  Biochemistry       Date:  2008-09-05       Impact factor: 3.162

Review 2.  The Heme-Based Oxygen-Sensor Phosphodiesterase Ec DOS (DosP): Structure-Function Relationships.

Authors:  Toru Shimizu
Journal:  Biosensors (Basel)       Date:  2013-06-17
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.