Literature DB >> 15371353

Core promoter sequences contribute to ovo-B regulation in the Drosophila melanogaster germline.

Beata Bielinska1, Jining Lü, David Sturgill, Brian Oliver.   

Abstract

Utilization of tightly linked ovo-A vs. ovo-B germline promoters results in the expression of OVO-A and OVO-B, C(2)H(2) transcription factors with different N -termini, and different effects on target gene transcription and on female germline development. We show that two sex-determination signals, the X chromosome number within the germ cells and a female soma, differentially regulate ovo-B and ovo-A. We have previously shown that OVO regulates ovarian tumor transcription by binding the transcription start site. We have explored the regulation of the ovo-B promoter using an extensive series of transgenic reporter gene constructs to delimit cis-regulatory sequences as assayed in wild-type and sex-transformed flies and flies with altered ovo dose. Minimum regulated expression of ovo-B requires a short region flanking the transcription start site, suggesting that the ovo-B core promoter bears regulatory information in addition to a "basal" activity. In support of this idea, the core promoter region binds distinct factors in ovary and testis extracts, but not in soma extracts, suggesting that regulatory complexes form at the start site. This idea is further supported by the evolutionarily conserved organization of OVO binding sites at or near the start sites of ovo loci in other flies.

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Year:  2004        PMID: 15371353      PMCID: PMC1350745          DOI: 10.1534/genetics.104.033118

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  35 in total

1.  Characterization of Drosophila OVO protein DNA binding specificity using random DNA oligomer selection suggests zinc finger degeneration.

Authors:  S Lee; M D Garfinkel
Journal:  Nucleic Acids Res       Date:  2000-02-01       Impact factor: 16.971

2.  New AUG initiation codons in a long 5' UTR create four dominant negative alleles of the Drosophila C2H2 zinc-finger gene ovo.

Authors:  J Andrews; I Levenson; B Oliver
Journal:  Dev Genes Evol       Date:  1998-01       Impact factor: 0.900

3.  ovo/svb integrates Wingless and DER pathways to control epidermis differentiation.

Authors:  F Payre; A Vincent; S Carreno
Journal:  Nature       Date:  1999-07-15       Impact factor: 49.962

4.  The ovo gene required for cuticle formation and oogenesis in flies is involved in hair formation and spermatogenesis in mice.

Authors:  X Dai; C Schonbaum; L Degenstein; W Bai; A Mahowald; E Fuchs
Journal:  Genes Dev       Date:  1998-11-01       Impact factor: 11.361

5.  Molecular genetics of the Drosophila melanogaster ovo locus, a gene required for sex determination of germline cells.

Authors:  M D Garfinkel; A R Lohe; A P Mahowald
Journal:  Genetics       Date:  1992-04       Impact factor: 4.562

6.  Drosophila OVO zinc-finger protein regulates ovo and ovarian tumor target promoters.

Authors:  J Lü; J Andrews; D Pauli; B Oliver
Journal:  Dev Genes Evol       Date:  1998-06       Impact factor: 0.900

7.  The ovo gene of Drosophila encodes a zinc finger protein required for female germ line development.

Authors:  M Mével-Ninio; R Terracol; F C Kafatos
Journal:  EMBO J       Date:  1991-08       Impact factor: 11.598

8.  The three dominant female-sterile mutations of the Drosophila ovo gene are point mutations that create new translation-initiator AUG codons.

Authors:  M Mével-Ninio; E Fouilloux; I Guénal; A Vincent
Journal:  Development       Date:  1996-12       Impact factor: 6.868

9.  Function of Drosophila ovo+ in germ-line sex determination depends on X-chromosome number.

Authors:  B Oliver; J Singer; V Laget; G Pennetta; D Pauli
Journal:  Development       Date:  1994-11       Impact factor: 6.868

10.  Regulatory and functional interactions between the somatic sex regulatory gene transformer and the germline genes ovo and ovarian tumor.

Authors:  S Hinson; R N Nagoshi
Journal:  Development       Date:  1999-02       Impact factor: 6.868

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  9 in total

1.  Conserved role of Ovo in germline development in mouse and Drosophila.

Authors:  Makoto Hayashi; Yuko Shinozuka; Shuji Shigenobu; Masanao Sato; Michihiko Sugimoto; Seiji Ito; Kuniya Abe; Satoru Kobayashi
Journal:  Sci Rep       Date:  2017-01-06       Impact factor: 4.379

2.  Drosophila germline sex determination: integration of germline autonomous cues and somatic signals.

Authors:  Leonie U Hempel; Rasika Kalamegham; John E Smith; Brian Oliver
Journal:  Curr Top Dev Biol       Date:  2008       Impact factor: 4.897

3.  Global analysis of X-chromosome dosage compensation.

Authors:  Vaijayanti Gupta; Michael Parisi; David Sturgill; Rachel Nuttall; Michael Doctolero; Olga K Dudko; James D Malley; P Scott Eastman; Brian Oliver
Journal:  J Biol       Date:  2006-02-16

4.  Comparative genomics of Drosophila and human core promoters.

Authors:  Peter C FitzGerald; David Sturgill; Andrey Shyakhtenko; Brian Oliver; Charles Vinson
Journal:  Genome Biol       Date:  2006       Impact factor: 13.583

5.  Genome-wide computational prediction and analysis of core promoter elements across plant monocots and dicots.

Authors:  Sunita Kumari; Doreen Ware
Journal:  PLoS One       Date:  2013-10-29       Impact factor: 3.240

6.  Comparative validation of the D. melanogaster modENCODE transcriptome annotation.

Authors:  Zhen-Xia Chen; David Sturgill; Jiaxin Qu; Huaiyang Jiang; Soo Park; Nathan Boley; Ana Maria Suzuki; Anthony R Fletcher; David C Plachetzki; Peter C FitzGerald; Carlo G Artieri; Joel Atallah; Olga Barmina; James B Brown; Kerstin P Blankenburg; Emily Clough; Abhijit Dasgupta; Sai Gubbala; Yi Han; Joy C Jayaseelan; Divya Kalra; Yoo-Ah Kim; Christie L Kovar; Sandra L Lee; Mingmei Li; James D Malley; John H Malone; Tittu Mathew; Nicolas R Mattiuzzo; Mala Munidasa; Donna M Muzny; Fiona Ongeri; Lora Perales; Teresa M Przytycka; Ling-Ling Pu; Garrett Robinson; Rebecca L Thornton; Nehad Saada; Steven E Scherer; Harold E Smith; Charles Vinson; Crystal B Warner; Kim C Worley; Yuan-Qing Wu; Xiaoyan Zou; Peter Cherbas; Manolis Kellis; Michael B Eisen; Fabio Piano; Karin Kionte; David H Fitch; Paul W Sternberg; Asher D Cutter; Michael O Duff; Roger A Hoskins; Brenton R Graveley; Richard A Gibbs; Peter J Bickel; Artyom Kopp; Piero Carninci; Susan E Celniker; Brian Oliver; Stephen Richards
Journal:  Genome Res       Date:  2014-07       Impact factor: 9.043

7.  CRISPR Disruption of BmOvo Resulted in the Failure of Emergence and Affected the Wing and Gonad Development in the Silkworm Bombyx mori.

Authors:  Honglun Bi; Xia Xu; Xiaowei Li; Yong Zhang; Yongping Huang; Kai Li; Jun Xu
Journal:  Insects       Date:  2019-08-19       Impact factor: 2.769

8.  Reprogramming of regulatory network using expression uncovers sex-specific gene regulation in Drosophila.

Authors:  Yijie Wang; Dong-Yeon Cho; Hangnoh Lee; Justin Fear; Brian Oliver; Teresa M Przytycka
Journal:  Nat Commun       Date:  2018-10-03       Impact factor: 14.919

9.  A truncated form of a transcription factor Mamo activates vasa in Drosophila embryos.

Authors:  Shoichi Nakamura; Seiji Hira; Masato Fujiwara; Nasa Miyagata; Takuma Tsuji; Akane Kondo; Hiroshi Kimura; Yuko Shinozuka; Makoto Hayashi; Satoru Kobayashi; Masanori Mukai
Journal:  Commun Biol       Date:  2019-11-20
  9 in total

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