Literature DB >> 15369097

Inheritable genetic algorithm for biobjective 0/1 combinatorial optimization problems and its applications.

Shinn-Ying Ho1, Jian-Hung Chen, Meng-Hsun Huang.   

Abstract

In this paper, we formulate a special type of multiobjective optimization problems, named biobjective 0/1 combinatorial optimization problem BOCOP, and propose an inheritable genetic algorithm IGA with orthogonal array crossover (OAX) to efficiently find a complete set of nondominated solutions to BOCOP. BOCOP with n binary variables has two incommensurable and often competing objectives: minimizing the sum r of values of all binary variables and optimizing the system performance. BOCOP is NP-hard having a finite number C(n, r) of feasible solutions for a limited number r. The merits of IGA are threefold as follows: 1) OAX with the systematic reasoning ability based on orthogonal experimental design can efficiently explore the search space of C(n, r); 2) IGA can efficiently search the space of C(n, r+/-1) by inheriting a good solution in the space of C(n, r); and 3) The single-objective IGA can economically obtain a complete set of high-quality nondominated solutions in a single run. Two applications of BOCOP are used to illustrate the effectiveness of the proposed algorithm: polygonal approximation problem (PAP) and the problem of editing a minimum reference set for nearest neighbor classification (MRSP). It is shown empirically that IGA is efficient in finding complete sets of nondominated solutions to PAP and MRSP, compared with some existing methods.

Year:  2004        PMID: 15369097     DOI: 10.1109/tsmcb.2003.817090

Source DB:  PubMed          Journal:  IEEE Trans Syst Man Cybern B Cybern        ISSN: 1083-4419


  25 in total

1.  SPIKES: Identification of physicochemical properties of spike proteins across diverse host species of SARS-CoV-2.

Authors:  Srinivasulu Yerukala Sathipati; Ming-Ju Tsai; Tonia Carter; Sanjay K Shukla; Shinn-Ying Ho
Journal:  STAR Protoc       Date:  2022-05-24

2.  Evolutionary Learning-Derived Clinical-Radiomic Models for Predicting Early Recurrence of Hepatocellular Carcinoma after Resection.

Authors:  I-Cheng Lee; Jo-Yu Huang; Ting-Chun Chen; Chia-Heng Yen; Nai-Chi Chiu; Hsuen-En Hwang; Jia-Guan Huang; Chien-An Liu; Gar-Yang Chau; Rheun-Chuan Lee; Yi-Ping Hung; Yee Chao; Shinn-Ying Ho; Yi-Hsiang Huang
Journal:  Liver Cancer       Date:  2021-09-20       Impact factor: 11.740

3.  Predicting and analyzing DNA-binding domains using a systematic approach to identifying a set of informative physicochemical and biochemical properties.

Authors:  Hui-Lin Huang; I-Che Lin; Yi-Fan Liou; Chia-Ta Tsai; Kai-Ti Hsu; Wen-Lin Huang; Shinn-Jang Ho; Shinn-Ying Ho
Journal:  BMC Bioinformatics       Date:  2011-02-15       Impact factor: 3.169

4.  Discovery of prognostic biomarkers for predicting lung cancer metastasis using microarray and survival data.

Authors:  Hui-Ling Huang; Yu-Chung Wu; Li-Jen Su; Yun-Ju Huang; Phasit Charoenkwan; Wen-Liang Chen; Hua-Chin Lee; William Cheng-Chung Chu; Shinn-Ying Ho
Journal:  BMC Bioinformatics       Date:  2015-02-21       Impact factor: 3.169

5.  Predicting Neuroinflammation in Morphine Tolerance for Tolerance Therapy from Immunostaining Images of Rat Spinal Cord.

Authors:  Shinn-Long Lin; Fang-Lin Chang; Shinn-Ying Ho; Phasit Charoenkwan; Kuan-Wei Wang; Hui-Ling Huang
Journal:  PLoS One       Date:  2015-10-05       Impact factor: 3.240

6.  Prediction of linear B-cell epitopes of hepatitis C virus for vaccine development.

Authors:  Wen-Lin Huang; Ming-Ju Tsai; Kai-Ti Hsu; Jyun-Rong Wang; Yi-Hsiung Chen; Shinn-Ying Ho
Journal:  BMC Med Genomics       Date:  2015-12-09       Impact factor: 3.063

7.  Rule-based knowledge acquisition method for promoter prediction in human and Drosophila species.

Authors:  Wen-Lin Huang; Chun-Wei Tung; Chyn Liaw; Hui-Ling Huang; Shinn-Ying Ho
Journal:  ScientificWorldJournal       Date:  2014-01-29

8.  Prediction and analysis of protein solubility using a novel scoring card method with dipeptide composition.

Authors:  Hui-Ling Huang; Phasit Charoenkwan; Te-Fen Kao; Hua-Chin Lee; Fang-Lin Chang; Wen-Lin Huang; Shinn-Jang Ho; Li-Sun Shu; Wen-Liang Chen; Shinn-Ying Ho
Journal:  BMC Bioinformatics       Date:  2012-12-13       Impact factor: 3.169

9.  Computational identification of ubiquitylation sites from protein sequences.

Authors:  Chun-Wei Tung; Shinn-Ying Ho
Journal:  BMC Bioinformatics       Date:  2008-07-15       Impact factor: 3.169

10.  ProLoc-GO: utilizing informative Gene Ontology terms for sequence-based prediction of protein subcellular localization.

Authors:  Wen-Lin Huang; Chun-Wei Tung; Shih-Wen Ho; Shiow-Fen Hwang; Shinn-Ying Ho
Journal:  BMC Bioinformatics       Date:  2008-02-01       Impact factor: 3.169

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